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Updated PDB entries
2B88
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BU of 2b88 by Molmil
Structural basis for molecular recognition in an affibody:affibody complex
Descriptor: ZTaq affibody
Authors:Lendel, C, Dogan, J, Hard, T.
Deposit date:2005-10-06
Release date:2006-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for molecular recognition in an affibody:affibody complex.
J.Mol.Biol., 359, 2006
2B89
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Structural basis for molecular recognition in an affibody:affibody complex
Descriptor: anti-ZTaq affibody
Authors:Lendel, C, Dogan, J, Hard, T.
Deposit date:2005-10-06
Release date:2006-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for molecular recognition in an affibody:affibody complex.
J.Mol.Biol., 359, 2006
2BGF
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NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data
Descriptor: DI-UBIQUITIN
Authors:Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J.
Deposit date:2004-12-22
Release date:2005-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data
Proteins: Struct., Funct., Bioinf., 60, 2005
2BGP
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BU of 2bgp by Molmil
Mannan Binding Module from Man5C in bound conformation
Descriptor: ENDO-B1,4-MANNANASE 5C
Authors:Tunnicliffe, R.B, Bolam, D.N, Pell, G, Gilbert, H.J, Williamson, M.P.
Deposit date:2005-01-04
Release date:2005-03-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a Mannan-Specific Family 35 Carbohydrate-Binding Module: Evidence for Significant Conformational Changes Upon Ligand Binding
J.Mol.Biol., 347, 2005
2BL5
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Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein.
Descriptor: MGC83862 PROTEIN
Authors:Maguire, M.L, Guler-Gane, G, Nietlispach, D, Raine, A.R.C, Zorn, A.M, Standart, N, Broadhurst, R.W.
Deposit date:2005-03-01
Release date:2005-04-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and Backbone Dynamics of the Kh-Qua2 Region of the Xenopus Star/Gsg Quaking Protein
J.Mol.Biol., 348, 2005
2BL6
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Solution structure of the Zn complex of EIAV NCp11(22-58) peptide, including two CCHC Zn-binding motifs.
Descriptor: NUCLEOCAPSID PROTEIN P11, ZINC ION
Authors:Amodeo, P, Castiglione-Morelli, M.A, Ostuni, A, Bavoso, A.
Deposit date:2005-03-02
Release date:2006-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Features in Eiav Ncp11: A Lentivirus Nucleocapsid Protein with a Short Linker
Biochemistry, 45, 2006
2BN5
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P-Element Somatic Inhibitor Protein Complex with U1-70k proline-rich peptide
Descriptor: PSI, U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDA
Authors:Ignjatovic, T, Yang, J.-C, Butler, P.J.G, Neuhaus, D, Nagai, K.
Deposit date:2005-03-21
Release date:2005-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of the Interaction between P-Element Somatic Inhibitor and U1-70K Essential for the Alternative Splicing of P-Element Transposase.
J.Mol.Biol., 351, 2005
2BN6
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P-Element Somatic Inhibitor Protein
Descriptor: PSI
Authors:Ignjatovic, T, Yang, J.C, Butler, P.J.G, Neuhaus, D, Nagai, K.
Deposit date:2005-03-21
Release date:2005-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of the Interaction between P-Element Somatic Inhibitor and U1-70K Essential for the Alternative Splicing of P-Element Transposase.
J.Mol.Biol., 351, 2005
2BN8
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Solution Structure and interactions of the E .coli Cell Division Activator Protein CedA
Descriptor: CELL DIVISION ACTIVATOR CEDA
Authors:Chen, H.A, Simpson, P, Huyton, T, Roper, D, Matthews, S.
Deposit date:2005-03-22
Release date:2006-12-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and Interactions of the Escherichia Coli Cell Division Activator Protein Ceda.
Biochemistry, 44, 2005
2BO5
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Bovine oligomycin sensitivity conferral protein N-terminal domain
Descriptor: ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN
Authors:Carbajo, R.J, Kellas, F.A, Runswick, M.J, Montgomery, M.G, Walker, J.E, Neuhaus, D.
Deposit date:2005-04-07
Release date:2005-08-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the F1-binding domain of the stator of bovine F1Fo-ATPase and how it binds an alpha-subunit.
J. Mol. Biol., 351, 2005
2BP4
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Zinc-binding domain of Alzheimer's disease amyloid beta-peptide in TFE-water (80-20) solution
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
Deposit date:2005-04-18
Release date:2005-04-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Changes of Region 1-16 of the Alzheimer Disease Amyloid Beta-Peptide Upon Zinc Binding and in Vitro Aging.
J.Biol.Chem., 281, 2006
2BQ2
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Solution Structure of the DNA Duplex ACGCGU-NA with a 2' Amido-Linked Nalidixic Acid Residue at the 3' Terminal Nucleotide
Descriptor: 5'-D(*AP*CP*GP*CP*GP*2AU)-3', NALIDIXIC ACID
Authors:Siegmund, K, Maheshwary, S, Narayanan, S, Connors, W, Richert, M.
Deposit date:2005-04-26
Release date:2006-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular details of quinolone-DNA interactions: solution structure of an unusually stable DNA duplex with covalently linked nalidixic acid residues and non-covalent complexes derived from it.
Nucleic Acids Res., 33, 2005
2BRU
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Complex of the domain I and domain III of Escherichia coli transhydrogenase
Descriptor: NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA, NAD(P) TRANSHYDROGENASE SUBUNIT BETA, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Johansson, T, Pedersen, A, Leckner, J, Karlsson, B.G.
Deposit date:2005-05-11
Release date:2006-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure Determination of a Transient Complex by NMR Using Paramagnetic Distance Restraints - the Complex of the Soluble Domains of Escherichia Coli Transhydrogenase
To be Published
2BTG
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peripheral-subunit binding domains from mesophilic,thermophilic, and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
Descriptor: DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX
Authors:Ferguson, N, Allen, M.D.
Deposit date:2005-05-31
Release date:2006-05-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
2BTH
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Peripheral-subunit binding domains from mesophilic, thermophilic, and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
Descriptor: DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX
Authors:Ferguson, N, Allen, M.D.
Deposit date:2005-05-31
Release date:2006-05-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
2BUD
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The solution structure of the chromo barrel domain from the males- absent on the first (MOF) protein
Descriptor: MALES-ABSENT ON THE FIRST PROTEIN
Authors:Nielsen, P.R, Nietlispach, D, Buscaino, A, Warner, R.J, Akhtar, A, Murzin, A.G, Murzina, N.V, Laue, E.D.
Deposit date:2005-06-09
Release date:2005-06-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Chromo Barrel Domain from the Mof Acetyltransferase
J.Biol.Chem., 280, 2005
2BUN
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Solution structure of the BLUF domain of AppA 5-125
Descriptor: APPA, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Grinstead, J.S, Hsu, S.-T, Laan, W, Bonvin, A.M.J.J, Hellingwerf, K.J, Boelens, R, Kaptein, R.
Deposit date:2005-06-15
Release date:2005-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The solution structure of the AppA BLUF domain: insight into the mechanism of light-induced signaling.
Chembiochem, 7, 2006
2BVK
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Hyaluronan: the local solution conformation determined by NMR and computer modelling is close to a contracted left-handed four-fold helix
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid
Authors:Almond, A, DeAngelis, P.L, Blundell, C.D.
Deposit date:2005-06-30
Release date:2006-10-30
Last modified:2024-05-15
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Hyaluronan: The Local Solution Conformation Determined by NMR and Computer Modeling is Close to a Contracted Left-Handed 4-Fold Helix.
J.Mol.Biol., 358, 2006
2BW2
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BofC from Bacillus subtilis
Descriptor: BYPASS OF FORESPORE C
Authors:Patterson, H.M, Brannigan, J.A, Cutting, S.M, Wilson, K.S, Wilkinson, A.J, Ab, E, Diercks, T, Folkers, G.E, de Jong, R.N, Truffault, V, Kaptein, R.
Deposit date:2005-07-08
Release date:2005-09-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of bypass of forespore C, an intercompartmental signaling factor during sporulation in Bacillus.
J. Biol. Chem., 280, 2005
2BZ2
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Solution structure of NELF E RRM
Descriptor: NEGATIVE ELONGATION FACTOR E
Authors:Schweimer, K, Rao, J.N, Neumann, L, Rosch, P, Wohrl, B.M.
Deposit date:2005-08-10
Release date:2006-08-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies on the RNA-recognition motif of NELF E, a cellular negative transcription elongation factor involved in the regulation of HIV transcription.
Biochem. J., 400, 2006
2BZB
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NMR Solution Structure of a protein aspartic acid phosphate phosphatase from Bacillus Anthracis
Descriptor: CONSERVED DOMAIN PROTEIN
Authors:Grenha, R, Rzechorzek, N.J, Brannigan, J.A, Ab, E, Folkers, G.E, De Jong, R.N, Diercks, T, Wilkinson, A.J, Kaptein, R, Wilson, K.S.
Deposit date:2005-08-14
Release date:2006-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of Spo0E-like protein-aspartic acid phosphatases that regulate sporulation in bacilli.
J. Biol. Chem., 281, 2006
2BZT
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NMR structure of the bacterial protein YFHJ from E. coli
Descriptor: PROTEIN ISCX
Authors:Pastore, C, Kelly, G, Adinolfi, S, Mc Cormick, J.E, Pastore, A.
Deposit date:2005-08-22
Release date:2006-12-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:YfhJ, a molecular adaptor in iron-sulfur cluster formation or a frataxin-like protein?
Structure, 14, 2006
2C0S
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BU of 2c0s by Molmil
NMR Solution Structure of a protein aspartic acid phosphate phosphatase from Bacillus Anthracis
Descriptor: CONSERVED DOMAIN PROTEIN
Authors:Grenha, R, Rzechorzek, N.J, Brannigan, J.A, Ab, E, Folkers, G.E, De Jong, R.N, Diercks, T, Wilkinson, A.J, Kaptein, R, Wilson, K.S.
Deposit date:2005-09-07
Release date:2006-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of Spo0E-like protein-aspartic acid phosphatases that regulate sporulation in bacilli.
J. Biol. Chem., 281, 2006
2C0X
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MOLECULAR STRUCTURE OF FD FILAMENTOUS BACTERIOPHAGE REFINED WITH RESPECT TO X-RAY FIBRE DIFFRACTION AND SOLID-STATE NMR DATA
Descriptor: COAT PROTEIN B
Authors:Marvin, D.A, Welsh, L.C, Symmons, M.F, Scott, W.R.P, Straus, S.K.
Deposit date:2005-09-08
Release date:2005-12-14
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Molecular Structure of Fd (F1, M13) Filamentous Bacteriophage Refined with Respect to X-Ray Fibre Diffraction and Solid-State NMR Data Supports Specific Models of Phage Assembly at the Bacterial Membrane.
J.Mol.Biol., 355, 2006
2C34
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Leishmania mexicana ICP
Descriptor: INHIBITOR OF CYSTEINE PEPTIDASES
Authors:Smith, B.O, Picken, N.C, Bromek, K, Westrop, G.D, Mottram, J.C, Coombs, G.H.
Deposit date:2005-10-04
Release date:2005-12-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of Leishmania Mexicana Icp Provides Evidence for Convergent Evolution of Cysteine Peptidase Inhibitors.
J.Biol.Chem., 281, 2006

219869

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