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Updated PDB entries
9LKT
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BU of 9lkt by Molmil
Human RNA Polymerase III de novo transcribing complex 10 (TC10)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA (123-MER), DNA-directed RNA polymerase III subunit RPC1, ...
Authors:Wang, Q.M, Ren, Y.L, Jin, Q.W, Chen, X.Z, Xu, Y.H.
Deposit date:2025-01-16
Release date:2025-04-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into human Pol III transcription initiation in action.
Nature, 643, 2025
9LMS
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BU of 9lms by Molmil
Crystal structure of Pichia pastoris-expressed FAST-PETase-N212A/K233C/S282C variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LMT
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Crystal structure of variant FAST-ACC-A248E
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LMU
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BU of 9lmu by Molmil
Crystal structure of variant FAST-ACC-A47E
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LMV
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Crystal structure of FAST-ACC-T140D/R132G/S160A mutant in complex with mono(2-hydroxyethyl) terephthalic acid
Descriptor: 4-(2-hydroxyethyloxycarbonyl)benzoic acid, Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LMW
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BU of 9lmw by Molmil
Crystal structure of variant FAST-ACC-T140E
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LMX
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BU of 9lmx by Molmil
Inactive mutant of FAST-ACC-T140E/R132G in complex with mono(2-hydroxyethyl) terephthalic acid
Descriptor: 4-(2-hydroxyethyloxycarbonyl)benzoic acid, Poly(ethylene terephthalate) hydrolase
Authors:Li, X, Ning, Z.Y, Huang, S.Q, Zeng, C, Zeng, Z.Y, Ji, R, Huang, J.-W, Chen, C.-C, Guo, R.-T.
Deposit date:2025-01-20
Release date:2025-07-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Combined approaches to enhance the Pichia pastoris-expressed PET hydrolase.
Int.J.Biol.Macromol., 320, 2025
9LN5
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Crystal structure of P450revI A241L mutant in complex with reveromycin T
Descriptor: (2E,4S,5S,6E,8E)-10-{(2R,3S,6S,8R,9S)-9-butyl-8-[(1E,3E)-4-carboxy-3-methylbuta-1,3-dien-1-yl]-3-methyl-1,7-dioxaspiro[5.5]undec-2-yl}-5-hydroxy-4,8-dimethyldeca-2,6,8-trienoic acid, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fujiyama, K, Yong, Y.F, Takahashi, S.
Deposit date:2025-01-20
Release date:2025-07-02
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Biosynthesis of reveromycin derivatives by altering the regioselectivity of cytochrome P450revI.
Chem Sci, 16, 2025
9LR5
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Crystal structure of Bacteroides thetaiotaomicron GH84 O-GlcNAcase D243N mutant
Descriptor: CALCIUM ION, O-GlcNAcase BT_4395
Authors:Ohnuma, T, Takeshita, D.
Deposit date:2025-01-29
Release date:2025-04-23
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (3.099 Å)
Cite:beta 1,6-Selective Enzymatic N-Acetylglucosamination Catalyzed by the Family GH84 N-Acetyl-beta-D-glucosaminidase from Bacteroides thetaiotaomicron and its Glycosyl Acceptor Specificity.
Chem Asian J, 20, 2025
9LXN
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BU of 9lxn by Molmil
Human RNA Polymerase III de novo transcribing complex 5 (TC5)(without 3'dATP)
Descriptor: DNA (127-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2025-02-18
Release date:2025-04-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into human Pol III transcription initiation in action.
Nature, 643, 2025
9LXO
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BU of 9lxo by Molmil
Human RNA Polymerase III de novo transcribing complex 6 (TC6)(without 3'dATP)
Descriptor: DNA (127-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Wang, Q, Ren, Y, Jin, Q, Chen, X, Xu, Y.
Deposit date:2025-02-18
Release date:2025-04-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into human Pol III transcription initiation in action.
Nature, 643, 2025
9M5M
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BU of 9m5m by Molmil
Crystal structure of Plasmodium vivax aspartyl-tRNA synthetase (PvDRS)
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, aspartate--tRNA ligase
Authors:Sharma, V.K, Manickam, Y, Bagale, S, Pradeepkumar, P.I, Sharma, A.
Deposit date:2025-03-06
Release date:2025-06-04
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target.
Plos Pathog., 21, 2025
9M5N
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Plasmodium vivax aspartyl-tRNA synthetase in complex with aspartyl-adenylate (Asp-AMP) Complex.
Descriptor: ACETATE ION, ASPARTYL-ADENOSINE-5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Sharma, V.K, Manickam, Y, Sharma, A, Bagale, S, Pradeepkumar, P.I.
Deposit date:2025-03-06
Release date:2025-06-04
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target.
Plos Pathog., 21, 2025
9M5O
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BU of 9m5o by Molmil
Plasmodium vivax aspartyl-tRNA synthetase in complex with aspartyl sulfamoyl adenosine (Asp-AMS) Complex
Descriptor: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MAGNESIUM ION, aspartate--tRNA ligase
Authors:Sharma, V.K, Manickam, Y, Sharma, A, Bagale, S, Pradeepkumar, P.I.
Deposit date:2025-03-06
Release date:2025-06-04
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target.
Plos Pathog., 21, 2025
9M8M
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Structure of photosynthetic LH1-RC complex the Halophilic Nonsulfur Purple Bacterium, Rhodothalassium salexigens
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, BACTERIOCHLOROPHYLL A, ...
Authors:Tani, K, Kanno, R, Inami, M, Ooya, T, Matsushita, R, Minamino, A, Takenaka, S, Takaichi, S, Purba, E.R, Hall, M, Mochizuki, T, Yu, L.-J, Mizoguchi, A, Humbel, B.M, Madigan, M.T, Kimura, Y, Wang-Otomo, Z.-Y.
Deposit date:2025-03-12
Release date:2025-07-02
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structure and Biochemistry of the LH1-RC Photocomplex from the Halophilic Purple Bacterium, Rhodothalassium salexigens .
Biochemistry, 64, 2025
9MCW
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BU of 9mcw by Molmil
OLE RNA dimer (Clostridium acetobutylicum)
Descriptor: OLE RNA dimer
Authors:Kretsch, R.C, Wu, Y, Das, R, Chiu, W.
Deposit date:2024-12-05
Release date:2025-04-23
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Naturally ornate RNA-only complexes revealed by cryo-EM.
Nature, 643, 2025
9MDS
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BU of 9mds by Molmil
ROOL RNA nanocage (env-120)
Descriptor: RNA (598-MER)
Authors:Kretsch, R.C, Wu, Y, Das, R, Chiu, W.
Deposit date:2024-12-05
Release date:2025-04-30
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Naturally ornate RNA-only complexes revealed by cryo-EM.
Nature, 643, 2025
9MEE
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BU of 9mee by Molmil
GOLLD RNA nanocage (env-38)
Descriptor: GOLLD RNA nanocage
Authors:Kretsch, R.C, Wu, Y, Nye, G, Das, R, Chiu, W.
Deposit date:2024-12-06
Release date:2025-04-30
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Naturally ornate RNA-only complexes revealed by cryo-EM.
Nature, 643, 2025
9MGK
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BU of 9mgk by Molmil
Human prostaglandin transporter(OATP2A1)
Descriptor: Digitonin, Solute carrier organic anion transporter family member 2A1
Authors:Yu, P, Orlando, M.A, Orlando, B.J.
Deposit date:2024-12-11
Release date:2025-07-23
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure and post-translational modification of the prostaglandin transporter.
Commun Biol, 8, 2025
9MOE
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BU of 9moe by Molmil
Preclinical and clinical evaluation of a novel TRPA1 antagonist LY3526318
Descriptor: (2S)-2-{3-methyl-1-[(3-methyl-1,2,4-oxadiazol-5-yl)methyl]-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl}-N-{6-[2-(trifluoromethyl)pyrimidin-5-yl]pyridin-2-yl}propanamide, Transient receptor potential cation channel subfamily A member 1
Authors:Nie, S.
Deposit date:2024-12-26
Release date:2025-05-21
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Preclinical and clinical evaluation of a novel TRPA1 antagonist LY3526318.
Pain, 166, 2025
9MR5
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BU of 9mr5 by Molmil
Cryo-EM structure of human OATP1C1 F240A mutant in complex with estrone 3-glucuronide
Descriptor: ESTRONE BETA-D-GLUCURONIDE, Solute carrier organic anion transporter family member 1C1
Authors:Ge, Y, Yadav, G.P, Jiang, J, Huang, P.
Deposit date:2025-01-07
Release date:2025-07-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural insights into brain thyroid hormone transport via MCT8 and OATP1C1.
Cell, 2025
9N3H
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BU of 9n3h by Molmil
Crystal structure of HBV capsid with compound 18
Descriptor: Capsid protein, N-[3-(difluoromethyl)phenyl]-5-[{[(1s,4s)-4-hydroxycyclohexyl]amino}(oxo)acetyl]-1,2,4-trimethyl-1H-pyrrole-3-carboxamide
Authors:White, A, Lakshminarasimhan, D, Cakici, O, Suto, R.
Deposit date:2025-01-31
Release date:2025-07-02
Last modified:2025-07-30
Method:X-RAY DIFFRACTION (2.543 Å)
Cite:Discovery of VNRX-9945, a Potent, Broadly Active Capsid Assembly Modulator as a Clinical Candidate for the Treatment of Chronic Hepatitis B Virus Infection.
Acs Med.Chem.Lett., 16, 2025
9N4V
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BU of 9n4v by Molmil
Azotobacter vinelandii extended type VI secretion system sheath tube complex
Descriptor: DUF877 family protein, Type VI secretion system contractile sheath small subunit
Authors:Warmack, R.A.
Deposit date:2025-02-03
Release date:2025-07-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (1.85 Å)
Cite:CryoEM-enabled visual proteomics reveals de novo structures of oligomeric protein complexes.
Structure, 2025
9N4W
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BU of 9n4w by Molmil
Decameric Glucose-6-phosphate isomerase from Azotobacter vinelandii
Descriptor: Glucose-6-phosphate isomerase
Authors:Warmack, R.A, Maggiolo, A.O.
Deposit date:2025-02-03
Release date:2025-07-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:CryoEM-enabled visual proteomics reveals de novo structures of oligomeric protein complexes.
Structure, 2025
9N4Y
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CryoEM structure of a filamentous soluble pyridine nucleotide transhydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Soluble pyridine nucleotide transhydrogenase
Authors:Warmack, R.A.
Deposit date:2025-02-03
Release date:2025-07-16
Last modified:2025-07-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:CryoEM-enabled visual proteomics reveals de novo structures of oligomeric protein complexes.
Structure, 2025

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PDB entries from 2025-07-30

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