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5TQW
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BU of 5tqw by Molmil
CryoEM reconstruction of human IKK1, open conformation 1
Descriptor: Inhibitor of nuclear factor kappa-B kinase subunit alpha
Authors:Lyumkis, D, Ghosh, G, Polley, S, Biswas, T, Huang, D, Passos, D.O.
Deposit date:2016-10-24
Release date:2016-11-09
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural Basis for the Activation of IKK1/ alpha.
Cell Rep, 17, 2016
5TQX
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BU of 5tqx by Molmil
CryoEM reconstruction of human IKK1, intermediate conformation 2
Descriptor: Inhibitor of nuclear factor kappa-B kinase subunit alpha
Authors:Lyumkis, D, Ghosh, G, Polley, S, Biswas, T, Huang, D, Passos, D.O.
Deposit date:2016-10-24
Release date:2016-11-09
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Structural Basis for the Activation of IKK1/ alpha.
Cell Rep, 17, 2016
5TQY
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BU of 5tqy by Molmil
CryoEM reconstruction of human IKK1, closed conformation 3
Descriptor: Inhibitor of nuclear factor kappa-B kinase subunit alpha
Authors:Lyumkis, D, Ghosh, G, Polley, S, Biswas, T, Huang, D, Passos, D.O.
Deposit date:2016-10-24
Release date:2016-11-09
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Structural Basis for the Activation of IKK1/ alpha.
Cell Rep, 17, 2016
5TVL
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BU of 5tvl by Molmil
Crystal structure of foldase protein PrsA from Streptococcus pneumoniae str. Canada MDR_19A
Descriptor: CHLORIDE ION, Foldase protein PrsA, GLYCEROL, ...
Authors:Borek, D, Yim, V, Kudritska, M, Wawrzak, Z, Stogios, P.J, Otwinowski, Z, Savchenko, A, Anderson, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-11-09
Release date:2016-11-23
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural analysis of extracellular ATP-independent chaperones of streptococcal species and protein substrate interactions.
Msphere, 10, 2025
5VGC
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BU of 5vgc by Molmil
Crystal structure of the NleG5-1 effector (C200A) from Escherichia coli O157:H7 str. Sakai
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Borek, D, Valleau, D, Skarina, T, Jobin, M.C, Wawrzak, Z, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-04-10
Release date:2018-04-18
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Functional diversification of the NleG effector family in enterohemorrhagic Escherichia coli.
Proc.Natl.Acad.Sci.USA, 115, 2018
6K4I
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BU of 6k4i by Molmil
The partially disordered conformation of ubiquitin (Q41N variant)
Descriptor: ubiquitin
Authors:Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R.
Deposit date:2019-05-24
Release date:2019-10-30
Last modified:2026-02-25
Method:SOLUTION NMR
Cite:Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
6OKZ
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BU of 6okz by Molmil
Structure of VcINDY bound to Fumarate
Descriptor: FUMARIC ACID, SODIUM ION, Transporter, ...
Authors:Sauer, D.B, Marden, J, Wang, D.N.
Deposit date:2019-04-15
Release date:2020-10-28
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter.
Proc.Natl.Acad.Sci.USA, 123, 2026
6OL0
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BU of 6ol0 by Molmil
Structure of VcINDY bound to Malate
Descriptor: (2S)-2-hydroxybutanedioic acid, SODIUM ION, Transporter, ...
Authors:Sauer, D.B, Marden, J.J, Wang, D.N.
Deposit date:2019-04-15
Release date:2020-10-28
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter.
Proc.Natl.Acad.Sci.USA, 123, 2026
6OL1
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BU of 6ol1 by Molmil
Structure of VcINDY in complex with Succinate
Descriptor: SODIUM ION, SUCCINIC ACID, Transporter, ...
Authors:Sauer, D.B, Marden, J.J, Wang, D.N.
Deposit date:2019-04-15
Release date:2020-10-28
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (3.088 Å)
Cite:Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter.
Proc.Natl.Acad.Sci.USA, 123, 2026
6SG2
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BU of 6sg2 by Molmil
FeFe Hydrogenase from Nitratidesulfovibrio vulgaris in Hinact state
Descriptor: HydB, IRON/SULFUR CLUSTER, Periplasmic [Fe] hydrogenase large subunit, ...
Authors:Galle, L.M, Span, I.
Deposit date:2019-08-02
Release date:2020-07-08
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Caught in the H inact : Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O 2 -stable State of [FeFe] Hydrogenase.
Angew.Chem.Int.Ed.Engl., 59, 2020
6UQF
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BU of 6uqf by Molmil
Human HCN1 channel in a hyperpolarized conformation
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, MERCURY (II) ION, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Lee, C.-H, MacKinnon, R.
Deposit date:2019-10-19
Release date:2019-12-11
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Voltage Sensor Movements during Hyperpolarization in the HCN Channel.
Cell, 179, 2019
7QVD
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BU of 7qvd by Molmil
X-ray structure of the lytic transglycosylase SltB2 from Pseudomonas aeruginosa
Descriptor: CALCIUM ION, Lytic murein transglycosylase
Authors:Batuecas, M.T, Miguel-Ruano, V, Hermoso, J.A.
Deposit date:2022-01-21
Release date:2023-08-16
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Characterization of Lytic Transglycosylase SltB2 of Pseudomonas aeruginosa.
Acs Omega, 10, 2025
7UUJ
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BU of 7uuj by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with gentamicin
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, ...
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
7UUK
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BU of 7uuk by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with tobramycin
Descriptor: Aminocyclitol acetyltransferase ApmA, CHLORIDE ION, TOBRAMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2023-04-19
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
7UUL
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BU of 7uul by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with kanamycin B and coenzyme A
Descriptor: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, ...
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
7UUM
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BU of 7uum by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with paromomycin and coenzyme A
Descriptor: Aminocyclitol acetyltransferase ApmA, COENZYME A, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Osipiuk, J, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
7UUN
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BU of 7uun by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA, complex with neomycin
Descriptor: 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, NEOMYCIN
Authors:Stogios, P.J, Evdokimova, E, Di Leo, R, Osipiuk, J, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
7UUO
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BU of 7uuo by Molmil
Crystal structure of aminoglycoside resistance enzyme ApmA H135A mutant, complex with tobramycin and coenzyme A
Descriptor: 1,2-ETHANEDIOL, Aminocyclitol acetyltransferase ApmA, COENZYME A, ...
Authors:Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Bordeleau, E, Wright, G.D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2022-04-28
Release date:2022-11-02
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance
Nat.Chem.Biol., 20, 2024
8BA7
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BU of 8ba7 by Molmil
CryoEM structure of nucleotide-free GroEL-Rubisco.
Descriptor: Chaperonin GroEL
Authors:Gardner, S, Saibil, H.R.
Deposit date:2022-10-11
Release date:2023-10-25
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural basis of substrate progression through the bacterial chaperonin cycle.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BA8
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BU of 8ba8 by Molmil
CryoEM structure of GroEL-ADP.BeF3-Rubisco.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
Authors:Gardner, S, Saibil, H.R.
Deposit date:2022-10-11
Release date:2023-12-27
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of substrate progression through the bacterial chaperonin cycle.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BA9
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BU of 8ba9 by Molmil
CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco.
Descriptor: 60 kDa chaperonin, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
Authors:Gardner, S, Saibil, H.R.
Deposit date:2022-10-11
Release date:2023-12-27
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of substrate progression through the bacterial chaperonin cycle.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BAA
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BU of 8baa by Molmil
CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco, class II.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Chaperonin GroEL, ...
Authors:Gardner, S, Saibil, H.R.
Deposit date:2022-10-11
Release date:2025-02-12
Last modified:2026-02-25
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of substrate progression through the bacterial chaperonin cycle.
Proc.Natl.Acad.Sci.USA, 120, 2023
8BJ7
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BU of 8bj7 by Molmil
Nitratidesulfovibrio vulgaris FeFe Hydrogenase C178A mutant in Hinact-like state
Descriptor: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
Authors:Bikbaev, K, Span, I.
Deposit date:2022-11-03
Release date:2023-03-22
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
8BJ8
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BU of 8bj8 by Molmil
Nitratidesulfovibrio vulgaris FeFe Hydrogenase C178A mutant in Htrans-like state
Descriptor: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
Authors:Bikbaev, K, Span, I.
Deposit date:2022-11-03
Release date:2023-04-26
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
8EZR
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BU of 8ezr by Molmil
Crystal structure of the HipS(Lp)-HipT(Lp) complex from Legionella pneumophila, native protein
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, HipS(Lp), ...
Authors:Stogios, P.J, Skarina, T, Michalska, K, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-11-01
Release date:2023-09-27
Last modified:2026-02-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Functional diversification despite structural congruence in the HipBST toxin-antitoxin system of Legionella pneumophila.
Mbio, 14, 2023

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