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1DCN
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BU of 1dcn by Molmil
INACTIVE MUTANT H162N OF DELTA 2 CRYSTALLIN WITH BOUND ARGININOSUCCINATE
Descriptor: ARGININOSUCCINATE, DELTA 2 CRYSTALLIN
Authors:Vallee, F, Turner, M.A, Lindley, P, Howell, P.L.
Deposit date:1998-10-29
Release date:1999-04-27
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an inactive duck delta II crystallin mutant with bound argininosuccinate.
Biochemistry, 38, 1999
1K7W
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BU of 1k7w by Molmil
Crystal Structure of S283A Duck Delta 2 Crystallin Mutant
Descriptor: ARGININOSUCCINATE, delta 2 crystallin
Authors:Sampaleanu, L.M, Yu, B, Howell, P.L.
Deposit date:2001-10-22
Release date:2002-03-06
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Mutational analysis of duck delta 2 crystallin and the structure of an inactive mutant with bound substrate provide insight into the enzymatic mechanism of argininosuccinate lyase.
J.Biol.Chem., 277, 2002
1N4L
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BU of 1n4l by Molmil
A DNA analogue of the polypurine tract of HIV-1
Descriptor: 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*AP*AP*AP*AP*AP*G)-3', 5'-D(*CP*TP*TP*TP*TP*TP*AP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3', Reverse Transcriptase
Authors:Cote, M.L, Pflomm, M, Georgiadis, M.M.
Deposit date:2002-10-31
Release date:2003-06-24
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Staying Straight with A-tracts: A DNA Analog of the HIV-1 Polypurine Tract
J.Mol.Biol., 330, 2003
1QQL
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BU of 1qql by Molmil
THE CRYSTAL STRUCTURE OF FIBROBLAST GROWTH FACTOR 7/1 CHIMERA
Descriptor: Fibroblast growth factor 7, Fibroblast growth factor 1 chimera
Authors:Ye, S, Luo, Y, Pelletier, H, McKeehan, W.L.
Deposit date:1999-06-07
Release date:2000-01-14
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for interaction of FGF-1, FGF-2, and FGF-7 with different heparan sulfate motifs.
Biochemistry, 40, 2001
1TJW
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BU of 1tjw by Molmil
Crystal Structure of T161D Duck Delta 2 Crystallin Mutant with bound argininosuccinate
Descriptor: ARGININOSUCCINATE, Delta crystallin II
Authors:Sampaleanu, L.M, Codding, P.W, Lobsanov, Y.D, Tsai, M, Smith, G.D, Horvatin, C, Howell, P.L.
Deposit date:2004-06-07
Release date:2004-09-07
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies of duck delta2 crystallin mutants provide insight into the role of Thr161 and the 280s loop in catalysis
Biochem.J., 384, 2004
2NV5
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BU of 2nv5 by Molmil
Crystal structure of a C-terminal phosphatase domain of Rattus norvegicus ortholog of human protein tyrosine phosphatase, receptor type, D (PTPRD)
Descriptor: protein-tyrosine-phosphatase
Authors:Bonanno, J.B, Gilmore, J, Bain, K.T, Iizuka, M, Xu, W, Wasserman, S, Smith, D, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-11-10
Release date:2006-11-21
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
4ZTT
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BU of 4ztt by Molmil
Crystal structures of ferritin mutants reveal diferric-peroxo intermediates
Descriptor: FE (II) ION, FE (III) ION, GLYCEROL, ...
Authors:Kim, S, Park, Y.H, Jung, S.W, Seok, J.H, Chung, Y.B, Lee, D.B, Gowda, G, Lee, J.H, Han, H.R, Cho, A.E, Lee, C, Chung, M.S, Kim, K.H.
Deposit date:2015-05-15
Release date:2016-06-15
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
5B59
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BU of 5b59 by Molmil
Hen egg-white lysozyme modified with a keto-ABNO.
Descriptor: (1~{S},5~{R})-9-oxidanyl-9-azabicyclo[3.3.1]nonan-3-one, Lysozyme C
Authors:Sasaki, D, Seki, Y, Sohma, Y, Oisaki, K, Kanai, M.
Deposit date:2016-04-28
Release date:2016-09-14
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Transition Metal-Free Tryptophan-Selective Bioconjugation of Proteins
J.Am.Chem.Soc., 138, 2016
5L6T
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BU of 5l6t by Molmil
CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
Descriptor: Aromatic foldamer, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Vallade, M, Langlois d'Estaintot, B, Granier, T, Huc, I.
Deposit date:2016-05-31
Release date:2017-06-21
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
To Be Published
5L70
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BU of 5l70 by Molmil
CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
Descriptor: Aromatic foldamer, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Vallade, M, Langlois d'Estaintot, B, Granier, T, Huc, I.
Deposit date:2016-06-01
Release date:2017-06-21
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
To Be Published
6H05
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BU of 6h05 by Molmil
Cryo-electron microscopic structure of the dihydrolipoamide succinyltransferase (E2) component of the human alpha-ketoglutarate (2-oxoglutarate) dehydrogenase complex [residues 218-453]
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
Authors:Nagy, B, Zambo, Z, Hubert, A, Polak, M, Nemeria, N.S, Novacek, J, Jordan, F, Adam-Vizi, V, Ambrus, A.
Deposit date:2018-07-06
Release date:2020-01-22
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase (E2) component of the human alpha-ketoglutarate dehydrogenase complex (hKGDHc) revealed by cryo-EM and cross-linking mass spectrometry: Implications for the overall hKGDHc structure.
Biochim Biophys Acta Gen Subj, 1865, 2021
6IEN
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BU of 6ien by Molmil
Substrate/product bound Argininosuccinate lyase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, ARGININE, ARGININOSUCCINATE, ...
Authors:Paul, A, Mishra, A, Surolia, A, Vijayan, M.
Deposit date:2018-09-14
Release date:2019-02-20
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural studies on M. tuberculosis argininosuccinate lyase and its liganded complex: Insights into catalytic mechanism.
IUBMB Life, 71, 2019
6IW7
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BU of 6iw7 by Molmil
structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
Descriptor: (2S)-2-benzamido-4-methyl-pentanoic acid, 4-[(4-fluoro-2-methyl-3H-indol-5-yl)oxy]-6-methoxy-7-[3-(pyrrolidin-1-yl)propoxy]quinazoline, ATP-dependent Clp protease proteolytic subunit 1, ...
Authors:Bao, R, Luo, Y.F, Zhu, Y.B, Yang, Y, Zhou, Y.Z.
Deposit date:2018-12-04
Release date:2020-01-01
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.69212103413 Å)
Cite:structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
To Be Published
6LB5
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BU of 6lb5 by Molmil
Crystal structure of dimeric RXR-LBD complexed with full agonist NEt-3IB and TIF2 co-activator
Descriptor: 6-[ethyl-[3-(2-methylpropoxy)-4-propan-2-yl-phenyl]amino]pyridine-3-carboxylic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Imai, D, Numoto, N, Nakano, S, Kakuta, H, Ito, N.
Deposit date:2019-11-13
Release date:2020-11-18
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the full and partial agonist activities of retinoid X receptor alpha ligands with an iso-butoxy and an isopropyl group
Biochem.Biophys.Res.Commun., 734, 2024
6LB6
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BU of 6lb6 by Molmil
Crystal structure of dimeric RXR-LBD complexed with partial agonist NEt-4IB and TIF2 co-activator
Descriptor: 6-[ethyl-[4-(2-methylpropoxy)-3-propan-2-yl-phenyl]amino]pyridine-3-carboxylic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Imai, D, Numoto, N, Nakano, S, Kakuta, H, Ito, N.
Deposit date:2019-11-13
Release date:2020-11-18
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the full and partial agonist activities of retinoid X receptor alpha ligands with an iso-butoxy and an isopropyl group
Biochem.Biophys.Res.Commun., 734, 2024
7AVP
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BU of 7avp by Molmil
Structure of marine actinobacteria clade rhodopsin (MacR) in violet form
Descriptor: Bacteriorhodopsin, EICOSANE
Authors:Gushchin, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gordeliy, V.
Deposit date:2020-11-05
Release date:2022-06-01
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Alternating Access Mechanism in a Minimalistic Light-Driven Proton Pump
To Be Published
7PCJ
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BU of 7pcj by Molmil
X-ray structure of CypA-C52AK125C/CsA/aromatic foldamer complex
Descriptor: Aromatic foldamer, Cyclosporin A, Peptidyl-prolyl cis-trans isomerase A
Authors:Vallade, M, Langlois d'Estaintot, B, Fischer, L, Buratto, J, Savko, M, Huc, I.
Deposit date:2021-08-03
Release date:2022-07-13
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:X-ray structure of a cystein mutant of Cyclophilin A tethered to an aromatic oligoamide foldamer complexed with Cyclosporin A
To Be Published
7TCT
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BU of 7tct by Molmil
Integrin alpha IIB beta3 complex with UR2922
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
Deposit date:2021-12-28
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7TD8
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BU of 7td8 by Molmil
Integrin alpha IIB beta3 complex with Tirofiban
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
Deposit date:2021-12-30
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7THO
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BU of 7tho by Molmil
Integrin alpha IIB beta3 complex with Eptifibatide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
Deposit date:2022-01-11
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7TMZ
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BU of 7tmz by Molmil
Integrin alpha IIB beta3 complex with BMS compound 4
Descriptor: (4-{[(5S)-3-{4-[(E)-imino(4-methylpiperazin-1-yl)methyl]phenyl}-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperazin-1-yl)acetic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
Deposit date:2022-01-20
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.20001999293 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7TPD
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BU of 7tpd by Molmil
Integrin alpha IIB beta3 complex with EF5154
Descriptor: (4-{[2-oxo-4-(piperidin-4-yl)piperazin-1-yl]acetyl}phenoxy)acetic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, J, Lin, F.-Y, Zhu, J, Springer, T.A.
Deposit date:2022-01-25
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7TPK
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BU of 7tpk by Molmil
SARS-CoV-2 E406W mutant RBD - Local Refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1
Authors:Addetia, A, Veesler, D.
Deposit date:2022-01-25
Release date:2023-02-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:SARS-CoV-2 E406W mutant RBD - Local Refinement
To Be Published
7U60
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BU of 7u60 by Molmil
Integrin alpha IIB beta3 complex with cRGDfV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARG-GLY-ASP-DPN-VAL, ...
Authors:Zhu, J, Lin, F.Y, Zhu, J, Springer, T.A.
Deposit date:2022-03-03
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
7U9F
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BU of 7u9f by Molmil
Integrin alpha IIB beta3 complex with BMS compound 4 in Mn2+
Descriptor: (4-{[(5S)-3-{4-[(E)-imino(4-methylpiperazin-1-yl)methyl]phenyl}-4,5-dihydro-1,2-oxazol-5-yl]methyl}piperazin-1-yl)acetic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lin, F.-Y, Zhu, J, Zhu, J, Springer, T.A.
Deposit date:2022-03-10
Release date:2022-08-17
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.70000525883 Å)
Cite:A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022

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PDB entries from 2024-10-02

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