Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
New PDB entries with X-ray structure factor data
8WL4
DownloadVisualize
BU of 8wl4 by Molmil
The structure of D-mandelate dehydrogenase with L103G and T143G mutations
Descriptor: 2-dehydropantoate 2-reductase
Authors:Liu, F, Rao, Z.M.
Deposit date:2023-09-29
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The structure of D-mandelate dehydrogenase with L103G and T143G mutations
To Be Published
8WM1
DownloadVisualize
BU of 8wm1 by Molmil
DHS dehydratase
Descriptor: 3-dehydroshikimate dehydratase (DHS dehydratase), CALCIUM ION
Authors:Wang, M.
Deposit date:2023-10-02
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:DHS dehydratase
To Be Published
8WMB
DownloadVisualize
BU of 8wmb by Molmil
Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase in Complex with Acetyl-CoA
Descriptor: ACETYL COENZYME *A, Arylalkylamine N-acetyltransferase 1
Authors:Wu, C.Y, Hu, I.C, Cheng, H.C, Lyu, P.C.
Deposit date:2023-10-03
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.645 Å)
Cite:Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase in Complex with Acetyl-CoA
To Be Published
8WME
DownloadVisualize
BU of 8wme by Molmil
Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Arylalkylamine N-acetyltransferase 1
Authors:Wu, C.Y, Hu, I.C, Cheng, H.C, Lyu, P.C.
Deposit date:2023-10-03
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.283 Å)
Cite:Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase in Complex with Acetyl-CoA
To Be Published
8WSH
DownloadVisualize
BU of 8wsh by Molmil
Crystal structure of SARS-Cov-2 main protease, pH=4.0
Descriptor: Replicase polyprotein 1ab
Authors:Zhou, X.L, Jiang, H.H, Zhang, J, Li, J.
Deposit date:2023-10-17
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of SARS-Cov-2 main protease ,pH=4.0
To Be Published
8WSJ
DownloadVisualize
BU of 8wsj by Molmil
Crystal structure of SARS-Cov-2 main protease, pH=6.5
Descriptor: 3C-like proteinase nsp5
Authors:Jiang, H.H, Zhou, X.L, Zhang, J, Li, J.
Deposit date:2023-10-17
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of SARS-Cov-2 main protease, pH=6.5
To Be Published
8WSK
DownloadVisualize
BU of 8wsk by Molmil
Crystal structure of SARS-Cov-2 main protease, pH=8.5
Descriptor: 3C-like proteinase nsp5
Authors:Jiang, H.H, Zhou, X.L, Zhang, J, Li, J.
Deposit date:2023-10-17
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of SARS-Cov-2 main protease, pH=8.5
To Be Published
8WWZ
DownloadVisualize
BU of 8wwz by Molmil
Crystal structure of Bacillus subtilis glyceraldehyde-3-phosphate dehydrogenase GapB
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase 2
Authors:Dahal, P, Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2023-10-27
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Bacillus subtilis glyceraldehyde-3-phosphate dehydrogenase GapB
Biodesign, 11, 2023
8X6Q
DownloadVisualize
BU of 8x6q by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F complexed with 2-acetyl-cyclohexane-2,4-dione
Descriptor: 2-OXOGLUTARIC ACID, 2-ethanoyl-3-oxidanyl-cyclohex-2-en-1-one, COBALT (II) ION, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-21
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X74
DownloadVisualize
BU of 8x74 by Molmil
Crystal structure of ZmHSL1A complexed with mesotrione
Descriptor: 2-OXOGLUTARIC ACID, 2-[(4-methylsulfonyl-2-nitro-phenyl)-oxidanyl-methylidene]cyclohexane-1,3-dione, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-22
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7C
DownloadVisualize
BU of 8x7c by Molmil
Crystal structure of ZmHSL1A
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7D
DownloadVisualize
BU of 8x7d by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, HPPD Inhibitor Sensitive 1-like 1 protein
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XC3
DownloadVisualize
BU of 8xc3 by Molmil
Crystal structure of ZmHSL1A-MBQ complex
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-12-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XYR
DownloadVisualize
BU of 8xyr by Molmil
De novo designed protein GPX4-2
Descriptor: De novo designed GPX4-2
Authors:Liu, L.J, Guo, Z, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8XYS
DownloadVisualize
BU of 8xys by Molmil
De novo designed protein GPX4-1
Descriptor: De novo designed GPX4-1
Authors:Liu, J.L, Guo, Z, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8XYT
DownloadVisualize
BU of 8xyt by Molmil
De novo designed protein GPX4-4
Descriptor: De novo designed GPX4-4
Authors:Liu, J.L, Guo, Z, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8XYU
DownloadVisualize
BU of 8xyu by Molmil
De novo designed protein GPX4-3
Descriptor: De novo designed GPX4-3
Authors:Guo, Z, Liu, J.L, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8XYV
DownloadVisualize
BU of 8xyv by Molmil
De novo designed protein 0705-5
Descriptor: De novo designed protein 0705-5
Authors:Liu, J.L, Guo, Z, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8XYW
DownloadVisualize
BU of 8xyw by Molmil
De novo designed protein Trx-3
Descriptor: De novo designed Trx-3
Authors:Liu, J.L, Guo, Z, Lai, L.H.
Deposit date:2024-01-20
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:All-Atom Protein Sequence Design Based on Geometric Deep Learning.
Angew.Chem.Int.Ed.Engl., 2024
8YJN
DownloadVisualize
BU of 8yjn by Molmil
Structure of E. coli glycyl radical enzyme YbiW with bound glycerol
Descriptor: GLYCEROL, Probable dehydratase YbiW
Authors:Xue, B, Wei, Y, Robinson, R.C, Yew, W.S, Zhang, Y.
Deposit date:2024-03-02
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 2024
8YJO
DownloadVisualize
BU of 8yjo by Molmil
Structure of E. coli glycyl radical enzyme PflD with bound malonate
Descriptor: MALONATE ION, Probable dehydratase PflD
Authors:Xue, B, Wei, Y, Robinson, R.C, Yew, W.S, Zhang, Y.
Deposit date:2024-03-02
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Widespread Radical-Mediated Glycolysis Pathway.
J.Am.Chem.Soc., 2024
8YSV
DownloadVisualize
BU of 8ysv by Molmil
Crystal structure of beta - glucosidase 6PG from Enterococcus faecalis
Descriptor: 1,2-ETHANEDIOL, 6-phospho-beta-glucosidase, ETHANOL, ...
Authors:Wang, W.Y, Li, Y.J, Liu, Z.Y, Han, X.D.
Deposit date:2024-03-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of beta - glucosidase 6PG from Enterococcus faecalis
To Be Published
8Z2M
DownloadVisualize
BU of 8z2m by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11
Descriptor: Glycinyltransferase, SULFATE ION
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
8Z2N
DownloadVisualize
BU of 8z2n by Molmil
Crystal structure of 5-phosphomethyl-2'-deoxyuridine (5-PmdU) glycinyltransferase gp46/PUGT from Pseudomonads phage PaMx11 in complex with dsDNA
Descriptor: CALCIUM ION, DNA (5'-D(*TP*AP*GP*TP*CP*GP*AP*CP*GP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*CP*GP*TP*CP*GP*AP*CP*TP*A)-3'), ...
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024
8Z2O
DownloadVisualize
BU of 8z2o by Molmil
Crystal structure of 5-N-alpha-glycinylthymidine (N-alpha-GlyT) FAD-dependent lyase gp47/NGTO from Pseudomonads phage PaMx11
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent lyase, ...
Authors:Wen, Y, Guo, W.T, Wu, B.X.
Deposit date:2024-04-13
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the biosynthetic mechanism of N alpha-GlyT and 5-NmdU hypermodifications of DNA.
Nucleic Acids Res., 2024

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon