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All PDB entries with X-ray structure factor data
1S68
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Structure and Mechanism of RNA Ligase
Descriptor: ADENOSINE MONOPHOSPHATE, RNA Ligase 2
Authors:Ho, C.K, Wang, L.K, Lima, C.D, Shuman, S.
Deposit date:2004-01-22
Release date:2004-02-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of RNA ligase.
Structure, 12, 2004
1S69
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The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with cyanide ligand
Descriptor: CITRATE ANION, CYANIDE ION, Cyanoglobin, ...
Authors:Trent III, J.T, Kundu, S, Hoy, J.A, Hargrove, M.S.
Deposit date:2004-01-22
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin.
J.Mol.Biol., 341, 2004
1S6A
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The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with azide ligand
Descriptor: AZIDE ION, CITRATE ANION, Cyanoglobin, ...
Authors:Trent III, J.T, Kundu, S, Hoy, J.A, Hargrove, M.S.
Deposit date:2004-01-22
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin.
J.Mol.Biol., 341, 2004
1S6C
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Crystal structure of the complex between KChIP1 and Kv4.2 N1-30
Descriptor: CALCIUM ION, Kv4 potassium channel-interacting protein KChIP1b, Potassium voltage-gated channel subfamily D member 2
Authors:Zhou, W, Qian, Y, Kunjilwar, K, Pfaffinger, P.J, Choe, S.
Deposit date:2004-01-23
Release date:2004-02-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the functional interaction of KChIP1 with Shal-type K(+) channels.
Neuron, 41, 2004
1S6F
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PORCINE TRYPSIN COVALENT COMPLEX WITH BORATE AND GUANIDINE-3 INHIBITOR
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, SULFATE ION, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
Deposit date:2004-01-23
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
1S6H
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PORCINE TRYPSIN COMPLEXED WITH GUANIDINE-3-PROPANOL INHIBITOR
Descriptor: 4-(HYDROXYMETHYL)BENZAMIDINE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
Deposit date:2004-01-23
Release date:2004-03-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
1S6P
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CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943
Descriptor: 1-(4-CYANO-PHENYL)-3-[2-(2,6-DICHLORO-PHENYL)-1-IMINO-ETHYL]-THIOUREA, MAGNESIUM ION, POL polyprotein [Contains: Reverse transcriptase]
Authors:Das, K, Arnold, E.
Deposit date:2004-01-26
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants
J.Med.Chem., 47, 2004
1S6Q
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CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R147681
Descriptor: 4-[4-(2,4,6-TRIMETHYL-PHENYLAMINO)-PYRIMIDIN-2-YLAMINO]-BENZONITRILE, POL polyprotein [Contains: Reverse transcriptase]
Authors:Das, K, Arnold, E.
Deposit date:2004-01-26
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants.
J.Med.Chem., 47, 2004
1S6R
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908R class c beta-lactamase bound to iodo-acetamido-phenyl boronic acid
Descriptor: 4-IODO-ACETAMIDO PHENYLBORONIC ACID, beta-lactamase
Authors:Wouters, J.
Deposit date:2004-01-27
Release date:2004-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of Enterobacter cloacae 908R class C beta-lactamase bound to iodo-acetamido-phenyl boronic acid, a transition-state analogue.
Cell.Mol.Life Sci., 60, 2003
1S6V
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Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link
Descriptor: Cytochrome c peroxidase, mitochondrial, Cytochrome c, ...
Authors:Guo, M, Bhaskar, B, Li, H, Barrows, T.P, Poulos, T.L.
Deposit date:2004-01-27
Release date:2004-04-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure and characterization of a cytochrome c peroxidase-cytochrome c site-specific cross-link
Proc.Natl.Acad.Sci.USA, 101, 2004
1S6Y
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2.3A crystal structure of phospho-beta-glucosidase
Descriptor: 6-phospho-beta-glucosidase
Authors:Tereshko, V, Dementieva, I, Kim, Y, Collat, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-28
Release date:2004-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:2.3A CRYSTAL STRUCTURE OF PHOSPHO-BETA-GLUCOSIDASE, licH Gene Product from BACILLUS STEAROTHERMOPHILUS
To be Published
1S6Z
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Enhanced Green Fluorescent Protein Containing the Y66L Substitution
Descriptor: CHLORIDE ION, green fluorescent protein
Authors:Rosenow, M.A, Huffman, H.A, Phail, M.E, Wachter, R.M.
Deposit date:2004-01-28
Release date:2004-05-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of the Y66L Variant of Green Fluorescent Protein Supports a Cyclization-Oxidation-Dehydration Mechanism for Chromophore Maturation(,).
Biochemistry, 43, 2004
1S72
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REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L11P, ...
Authors:Klein, D.J, Schmeing, T.M, Moore, P.B, Steitz, T.A.
Deposit date:2004-01-28
Release date:2004-06-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Roles of Ribosomal Proteins in the Structure, Assembly and Evolution of the Large Ribosomal Subunit
J.Mol.Biol., 340, 2004
1S73
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Crystal Structure of Mesopone Cytochrome c Peroxidase (R-isomer) [MpCcP-R]
Descriptor: Cytochrome c peroxidase, mitochondrial, FE-(4-MESOPORPHYRINONE)-R-ISOMER
Authors:Bhaskar, B, Immoos, C.E, Sulc, F, Choen, M.S, Farmer, P.J, Poulos, T.L.
Deposit date:2004-01-28
Release date:2005-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal structures of reduced, resting and NO-bound states of mesopone cytochorme c peroxidase (MpCcP) (R-isomer)
To be Published
1S76
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T7 RNA polymerase alpha beta methylene ATP elongation complex
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (5'-D(P*GP*CP*CP*GP*TP*GP*CP*GP*CP*AP*TP*TP*CP*GP*CP*CP*GP*TP*GP*TP*T)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*GP*TP*TP*GP*CP*GP*CP*AP*CP*GP*GP*C)-3'), ...
Authors:Yin, Y.W, Steitz, T.A.
Deposit date:2004-01-29
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The structural mechanism of translocation and helicase activity in T7 RNA polymerase.
Cell(Cambridge,Mass.), 116, 2004
1S77
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T7 RNAP product pyrophosphate elongation complex
Descriptor: DNA (5'-D(*GP*CP*CP*GP*TP*GP*CP*GP*CP*AP*TP*TP*CP*GP*CP*CP*GP*TP*GP*TP*T)-3'), DNA (5'-D(*TP*TP*TP*AP*CP*GP*TP*TP*GP*CP*GP*CP*AP*CP*GP*GP*C)-3'), DNA-directed RNA polymerase, ...
Authors:Yin, Y.W, Steitz, T.A.
Deposit date:2004-01-29
Release date:2004-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:The structural mechanism of translocation and helicase activity in T7 RNA polymerase.
Cell(Cambridge,Mass.), 116, 2004
1S78
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Insights into ErbB signaling from the structure of the ErbB2-pertuzumab complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Pertuzumab Fab heavy chain, ...
Authors:Franklin, M.C, Carey, K.D, Vajdos, F.F, Leahy, D.J, de Vos, A.M, Sliwkowski, M.X.
Deposit date:2004-01-29
Release date:2004-04-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Insights into ErbB signaling from the structure of the ErbB2-pertuzumab complex.
Cancer Cell, 5, 2004
1S7C
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Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glyceraldehyde 3-phosphate dehydrogenase A, SULFATE ION
Authors:Shin, D.H, Thor, J, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-29
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli
To be Published
1S7D
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Crystal structure of refined tetragonal crystal of YodA from Escherichia coli
Descriptor: Metal-binding Protein yodA, ZINC ION
Authors:Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-29
Release date:2004-08-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of refined tetragonal crystal of YodA from Escherichia coli
TO BE PUBLISHED
1S7F
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RimL- Ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form I (apo)
Descriptor: CHLORIDE ION, MALONIC ACID, acetyl transferase
Authors:Vetting, M.W, de Carvalho, L.P, Roderick, S.L, Blanchard, J.S.
Deposit date:2004-01-29
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel dimeric structure of the RimL Nalpha-acetyltransferase from Salmonella typhimurium.
J.Biol.Chem., 280, 2005
1S7G
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Structural Basis for the Mechanism and Regulation of Sir2 Enzymes
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5-DIPHOSPHORIBOSE, HEXAETHYLENE GLYCOL, ...
Authors:Avalos, J.L, Boeke, J.D, Wolberger, C.
Deposit date:2004-01-29
Release date:2004-03-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the mechanism and regulation of sir2 enzymes
Mol.Cell, 13, 2004
1S7H
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Structural Genomics, 2.2A crystal structure of protein YKOF from Bacillus subtilis
Descriptor: ykoF
Authors:Zhang, R, Lezondra, L, Moy, S, Dementieva, I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-29
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:2.2A crystal structure of protein YKOF from Bacillus subtilis
To be Published
1S7I
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1.8 A Crystal Structure of a Protein of Unknown Function PA1349 from Pseudomonas aeruginosa
Descriptor: hypothetical protein PA1349
Authors:Zhang, R, Skarina, T, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-01-29
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8A crystal structure of a hypothetical protein PA1349 from Pseudomonas aeruginosa
To be Published
1S7J
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Crystal structure of phenazine biosynthesis protein PhzF family (Enterococcus faecalis)
Descriptor: phenazine biosynthesis protein PhzF family
Authors:Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-01-29
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of phenazine biosynthesis protein from Enterococcus faecalis
To be Published
1S7K
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RimL- Ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form 2 (apo)
Descriptor: acetyl transferase
Authors:Vetting, M.W, de Carvalho, L.P, Roderick, S.L, Blanchard, J.S.
Deposit date:2004-01-29
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel dimeric structure of the RimL Nalpha-acetyltransferase from Salmonella typhimurium.
J.Biol.Chem., 280, 2005

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