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NMR 化学シフト データを含む全ての PDB エントリー
5US5
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Solution structure of the IreB homodimer
分子名称: UPF0297 protein EF_1202
著者Lytle, B.L, Peterson, F.C, Volkman, B.F, Kristich, C.J, Center for Eukaryotic Structural Genomics (CESG)
登録日2017-02-13
公開日2017-06-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Dimerization of IreB, a Negative Regulator of Cephalosporin Resistance in Enterococcus faecalis.
J. Mol. Biol., 429, 2017
5UTG
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Red abalone lysin F104A
分子名称: Egg-lysin
著者Wilburn, D.B, Tuttle, L.M.
登録日2017-02-14
公開日2018-01-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5UTV
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SARS-unique fold in the Rousettus Bat Coronavirus HKU9
分子名称: Papain-like proteinase
著者Hammond, R.G, Tan, X, Johnson, M.A.
登録日2017-02-15
公開日2017-06-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献SARS-unique fold in the Rousettus bat coronavirus HKU9.
Protein Sci., 26, 2017
5UY2
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peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
分子名称: 20-mer Peptide 38146
著者Bermudez, A, Patarroyo, M.E.
登録日2017-02-23
公開日2018-06-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
To Be Published
5UYO
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Solution NMR structure of the de novo mini protein HEEH_rd4_0097
分子名称: HEEH_rd4_0097
著者Lemak, A, Rocklin, G.J, Houliston, S, Carter, L, Chidyausiku, T.M, Baker, D, Arrowsmith, C.H.
登録日2017-02-24
公開日2017-07-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Global analysis of protein folding using massively parallel design, synthesis, and testing.
Science, 357, 2017
5UZ1
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Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 3rd position and 8-oxoguanine at the 10th position
分子名称: DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*CP*(8OG)P*CP*G)-3')
著者Gruber, D.R, Hoppins, J.J, Miears, H.L, Endutkin, A.V, Zharkov, D.O, Smirnov, S.L.
登録日2017-02-24
公開日2017-05-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
5UZ2
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Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 3rd and 9th position and 8-oxoguanine at the 10th position
分子名称: DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3')
著者Gruber, D.R, Hoppins, J.J, Miears, H.L, Endutkin, A.V, Zharkov, D.O, Smirnov, S.L.
登録日2017-02-24
公開日2017-03-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
5UZ3
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Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 9th position and 8-oxoguanine at the 10th position
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3')
著者Gruber, D.R, Hoppins, J.J, Miears, H.L, Endutkin, A.V, Zharkov, D.O, Smirnov, S.L.
登録日2017-02-24
公開日2017-05-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation.
Nucleic Acids Res., 46, 2018
5UZD
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Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A2-DNA structure
分子名称: DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*TP*CP*GP*AP*TP*GP*C)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZF
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Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A6-DNA structure
分子名称: DNA (5'-D(*CP*GP*AP*TP*TP*TP*TP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*AP*AP*AP*AP*TP*CP*G)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZI
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Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A6-DNAm1A16 structure
分子名称: DNA (5'-D(*CP*GP*AP*TP*TP*TP*TP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*(M1A)P*AP*AP*AP*AP*AP*TP*CP*G)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZL
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Brassica napus DGAT1 exosite
分子名称: O-acyltransferase
著者Acedo, J.Z, Vederas, J.C.
登録日2017-02-26
公開日2018-01-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Diacylglycerol Acyltransferase 1 Is Regulated by Its N-Terminal Domain in Response to Allosteric Effectors.
Plant Physiol., 175, 2017
5UZT
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Structure of wild type pre-miR21 apical loop
分子名称: pre-miR-21
著者Shortridge, M.D, Varani, G.
登録日2017-02-27
公開日2017-05-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.
ACS Chem. Biol., 12, 2017
5UZZ
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Structure of wild type pre-miR21 apical loop
分子名称: 14-mer Peptide, pre-miR21
著者Shortridge, M.D, Varani, G.
登録日2017-02-27
公開日2017-06-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.
ACS Chem. Biol., 12, 2017
5V0Y
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Solution structure of arenicin-3.
分子名称: arenicin-3
著者Edwards, I.A, Mobli, M.
登録日2017-02-28
公開日2018-08-08
最終更新日2020-06-10
実験手法SOLUTION NMR
主引用文献An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria
Nat Commun, 2020
5V11
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Solution structure of arenicin-3 synthetic analog.
分子名称: AA139
著者Edwards, I.A, Mobli, M.
登録日2017-03-01
公開日2018-08-08
最終更新日2020-01-08
実験手法SOLUTION NMR
主引用文献Elucidating the Lipid Binding Properties of Membrane-Active Peptides Using Cyclised Nanodiscs.
Front Chem, 7, 2019
5V16
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5V17
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5V1E
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Suboptimization of a glycine rich peptide allows the combinatorial space exploration for designing novel antimicrobial peptides
分子名称: Guavanin 2
著者Alves, E.S.F, Matos, C.O.
登録日2017-03-02
公開日2018-03-07
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献In silico optimization of a guava antimicrobial peptide enables combinatorial exploration for peptide design.
Nat Commun, 9, 2018
5V2B
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Peptide 38148 modified from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
分子名称: Thrombospondin-related sporozoite protein
著者Bermudez, A, Patarroyo, M.E.
登録日2017-03-03
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Peptide 38148 modified from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
To Be Published
5V2G
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De Novo Design of Novel Covalent Constrained Meso-size Peptide Scaffolds with Unique Tertiary Structures
分子名称: 1,3,5-tris(bromomethyl)benzene, 20-mer Peptide
著者Dang, B, Wu, H, Mulligan, V.K, Mravic, M, Wu, Y, Lemmin, T, Ford, A, Silva, D, Baker, D, DeGrado, W.F.
登録日2017-03-03
公開日2017-09-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献De novo design of covalently constrained mesosize protein scaffolds with unique tertiary structures.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5V2R
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Structure of a GA Rich 8x8 Nucleotide RNA Internal Loop
分子名称: RNA (5'-R(*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*A)-3')
著者Kauffmann, A.D, Kennedy, S.D, Turner, D.H.
登録日2017-03-06
公開日2017-07-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Structure of an 8 8 Nucleotide RNA Internal Loop Flanked on Each Side by Three Watson-Crick Pairs and Comparison to Three-Dimensional Predictions.
Biochemistry, 56, 2017
5V4C
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Peptide 38136 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoites (CelTOS)
分子名称: Peptide 38136
著者Bermudez, A, Patarroyo, M.E.
登録日2017-03-09
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Peptide 38136 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoites (CelTOS)
To Be Published
5V4U
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Solution structure of VKK38 bound to plasminogen kringle 2
分子名称: M protein
著者Yuan, Y, Castellino, F.
登録日2017-03-10
公開日2017-07-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformationally organized lysine isosteres in Streptococcus pyogenes M protein mediate direct high-affinity binding to human plasminogen.
J. Biol. Chem., 292, 2017
5V7Z
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SSNMR Structure of the Human RIP1/RIP3 Necrosome
分子名称: PRO-LEU-VAL-ASN-ILE-TYR-ASN-CYS-SER-GLY-VAL-GLN-VAL-GLY-ASP, THR-ILE-TYR-ASN-SER-THR-GLY-ILE-GLN-ILE-GLY-ALA-TYR-ASN-TYR-MET-GLU-ILE
著者Mompean, M, Li, W, Li, J, Laage, S, Siemer, A.B, Wu, H, McDermott, A.E.
登録日2017-03-21
公開日2018-03-28
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex.
Cell, 173, 2018

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