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All PDB entries with NMR restraints data
7D2O
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BU of 7d2o by Molmil
Solution structure of Gaussia Luciferase by NMR
Descriptor: Luciferase
Authors:Kobayashi, N, Wu, N, Kuroda, Y, Yamazaki, T.
Deposit date:2020-09-17
Release date:2020-12-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of Gaussia Luciferase with five disulfide bonds and identification of a putative coelenterazine binding cavity by heteronuclear NMR.
Sci Rep, 10, 2020
7D37
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BU of 7d37 by Molmil
Solution structure of Acm2-precursor peptide of Heat-stable enterotoxin produced by Enterotoxigenic Escherichia coli
Descriptor: CYS-CY1-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CY1-THR-GLY-CYS
Authors:Shimamoto, S, Hidaka, Y.
Deposit date:2020-09-18
Release date:2020-12-16
Method:SOLUTION NMR
Cite:Topological Regulation of the Bioactive Conformation of a Disulfide-Rich Peptide, Heat-Stable Enterotoxin.
Molecules, 25, 2020
7D3V
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BU of 7d3v by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C.Y, Liu, Y.P, Lan, W.X.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3
To Be Published
7D3W
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BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C, Liu, Y, Lan, W.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3X
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BU of 7d3x by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
Authors:Cao, C, Liu, Y.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D5F
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BU of 7d5f by Molmil
Left-handed G-quadruplex containing 3 bulges
Descriptor: 3xBulge-LHG4motif
Authors:Winnerdy, F.R, Das, P, Ngo, K.H, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2020-09-25
Release date:2021-02-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D8K
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BU of 7d8k by Molmil
Solution structure of the methyl-CpG binding domain of MBD6 from Arabidopsis thaliana
Descriptor: Methyl-CpG-binding domain-containing protein 6
Authors:Mahana, Y, Ohki, I, Walinda, E, Morimoto, D, Sugase, K, Shirakawa, M.
Deposit date:2020-10-08
Release date:2021-10-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into Methylated DNA Recognition by the Methyl-CpG Binding Domain of MBD6 from Arabidopsis thaliana .
Acs Omega, 7, 2022
7DAB
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BU of 7dab by Molmil
plant peptide hormone
Descriptor: Maternally expressed gene14
Authors:Umetsu, Y, Ohki, S.
Deposit date:2020-10-16
Release date:2021-10-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:plant peptide hormone
To Be Published
7DAC
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BU of 7dac by Molmil
Human RIPK3 amyloid fibril revealed by solid-state NMR
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Wu, X.L, Zhang, J, Dong, X.Q, Liu, J, Li, B, Hu, H, Wang, J, Wang, H.Y, Lu, J.X.
Deposit date:2020-10-16
Release date:2021-04-28
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DCV
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BU of 7dcv by Molmil
Structure of the transmembrane domain of human PD-L1
Descriptor: Programmed cell death 1 ligand 1
Authors:Maorong, W, Yunlei, C, Bo, O.Y.
Deposit date:2020-10-27
Release date:2022-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the transmembrane domain of human PD-L1
Sci Adv, 2022
7DD4
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BU of 7dd4 by Molmil
Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA
Descriptor: RNA (36-MER)
Authors:Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G.
Deposit date:2020-10-27
Release date:2021-06-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Sci Rep, 11, 2021
7DEE
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BU of 7dee by Molmil
Structural Basis of the regulation of DISC Assembly by the interaction of c-FLIPs with Procaspase-8
Descriptor: C8-H1a, CASP8 and FADD-like apoptosis regulator
Authors:Bai, Z.Q, Hu, K.F.
Deposit date:2020-11-03
Release date:2021-11-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Backbone and side-chain chemical shift assignments of a cellular FLICE-inhibitory protein (c-FLIPS)
Biomol NMR Assign, 14, 2020
7DEH
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BU of 7deh by Molmil
Solution structure of cecropin P1 in dodecylphosphocholine micelles
Descriptor: Cecropin-P1
Authors:Gu, H, Kumeta, H, Aizawa, T.
Deposit date:2020-11-04
Release date:2021-11-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues
Acs Omega, 7, 2022
7DFE
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BU of 7dfe by Molmil
NMR structure of TuSp2-RP
Descriptor: B6 protein
Authors:Lin, Z, Fan, T, Fan, J.
Deposit date:2020-11-07
Release date:2021-11-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H, 15N and 13C resonance assignments of a repetitive domain of tubuliform spidroin 2
Biomol.Nmr Assign., 15, 2021
7DHT
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BU of 7dht by Molmil
Solution structure of ATG8f of Arabidopsis thaliana
Descriptor: Autophagy-related protein 8f
Authors:Lee, K.M, Sun, S.L, Wong, K.B.
Deposit date:2020-11-17
Release date:2021-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanistic insights into an atypical interaction between ATG8 and SH3P2 in Arabidopsis thaliana.
Autophagy, 18, 2022
7DM4
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BU of 7dm4 by Molmil
Solution structure of ARID4B Tudor domain
Descriptor: AT-rich interactive domain-containing protein 4B
Authors:Ren, J, Yao, H, Hu, W, Perrett, S, Feng, Y, Gong, W.
Deposit date:2020-12-02
Release date:2021-03-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the DNA-binding activity of human ARID4B Tudor domain.
J.Biol.Chem., 296, 2021
7DMD
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BU of 7dmd by Molmil
Solution structure of human Aha1 N-terminal domain
Descriptor: Activator of 90 kDa heat shock protein ATPase homolog 1
Authors:Hu, H, Zhou, C, Zhang, N.
Deposit date:2020-12-03
Release date:2021-04-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like Activity.
Molecules, 26, 2021
7DME
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BU of 7dme by Molmil
Solution structure of human Aha1
Descriptor: Activator of 90 kDa heat shock protein ATPase homolog 1
Authors:Hu, H, Zhou, C, Zhang, N.
Deposit date:2020-12-03
Release date:2021-04-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like Activity.
Molecules, 26, 2021
7DO1
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BU of 7do1 by Molmil
Solution structure of a heteromolecular telomeric (3+1) G-quadruplex containing right loop progression
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*G)-3')
Authors:Fu, W.Q, Jing, H.T, Zhang, N.
Deposit date:2020-12-11
Release date:2021-09-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two coexisting pseudo-mirror heteromolecular telomeric G-quadruplexes in opposite loop progressions differentially recognized by a low equivalent of Thioflavin T.
Nucleic Acids Res., 49, 2021
7DOJ
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BU of 7doj by Molmil
Solution structure of TGS domain of the Mycobacterium tuberculosis Rel protein
Descriptor: GTP pyrophosphokinase
Authors:Joon, S, Singal, B, Grueber, G.
Deposit date:2020-12-14
Release date:2021-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Atomic structure of the regulatory TGS domain of Rel protein from Mycobacterium tuberculosis and its interaction with deacylated tRNA.
Febs Lett., 595, 2021
7DTA
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BU of 7dta by Molmil
Solution structure of the C-clamp domain from human HDBP1 in complex with DNA
Descriptor: DNA (5'-D(*GP*TP*CP*CP*CP*GP*GP*CP*AP*TP*A)-3'), DNA (5'-D(*TP*AP*TP*GP*CP*CP*GP*GP*GP*AP*C)-3'), SLC2A4 regulator, ...
Authors:Duan, B, Xia, B.
Deposit date:2021-01-04
Release date:2021-07-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Selective Nonmethylated CpG DNA Recognition Mechanism of Cysteine Clamp Domains.
J.Am.Chem.Soc., 143, 2021
7DTH
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BU of 7dth by Molmil
Solution structure of RPB6, common subunit of RNA polymerases I, II, and III
Descriptor: DNA-directed RNA polymerases I, II, and III subunit RPABC2
Authors:Okuda, M, Nishimura, Y.
Deposit date:2021-01-05
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three human RNA polymerases interact with TFIIH via a common RPB6 subunit.
Nucleic Acids Res., 50, 2022
7DTI
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BU of 7dti by Molmil
Solution structure of the complex between RNA polymerase subunit RPB6 and TFIIH p62 PH domain
Descriptor: DNA-directed RNA polymerases I, II, and III subunit RPABC2, ...
Authors:Okuda, M, Nishimura, Y.
Deposit date:2021-01-05
Release date:2022-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three human RNA polymerases interact with TFIIH via a common RPB6 subunit.
Nucleic Acids Res., 50, 2022
7DVM
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BU of 7dvm by Molmil
DgkA structure in E.coli lipid bilayer
Descriptor: Diacylglycerol kinase
Authors:Li, J, Yang, J.
Deposit date:2021-01-13
Release date:2022-04-13
Last modified:2023-09-27
Method:SOLID-STATE NMR
Cite:Structure of membrane diacylglycerol kinase in lipid bilayers.
Commun Biol, 4, 2021
7E42
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BU of 7e42 by Molmil
Solution strucutre of holo acyl carrier protein from Acinetobacter baumannii
Descriptor: Acyl carrier protein
Authors:Choi, S, Park, J, Kim, Y.
Deposit date:2021-02-10
Release date:2022-02-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:solution structure of holo acyl carrier protein in acinetobacter baumannii
To Be Published

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數據於2024-10-09公開中

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