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Legacy flatfile-incompatible PDB entries
9C61
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Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
Descriptor: (4R)-4-[4-(5-fluoro-1H-indol-3-yl)piperidine-1-carbonyl]piperidin-2-one, Non-specific serine/threonine protein kinase, UNKNOWN ATOM OR ION
Authors:Zeng, H, Dong, A, Kutera, M, Ilyassov, O, Seitova, A, Loppnau, P, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
Deposit date:2024-06-07
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
To be published
9C6P
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X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: 3-chloro-N-(5-chloro-2-methyl-1,3-benzothiazol-6-yl)-2-hydroxybenzene-1-sulfonamide, AmpC Beta-lactamase
Authors:Liu, F, Shoichet, B.K.
Deposit date:2024-06-08
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.663 Å)
Cite:Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C81
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X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid, AmpC Beta-lactamase
Authors:Liu, F, Shoichet, B.K, Bassim, V.
Deposit date:2024-06-11
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C82
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Structure of human ULK1C:PI3KC3-C1 supercomplex
Descriptor: Beclin 1-associated autophagy-related key regulator, Beclin-1, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
Authors:Chen, M, Hurley, J.H.
Deposit date:2024-06-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (6.84 Å)
Cite:Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex
bioRxiv, 2023
9C83
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X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: AmpC Beta-lactamase, N-[(3M)-3-(5-chloro-1,2,3-thiadiazol-4-yl)phenyl]-5-methyl-3-oxo-2,3-dihydro-1,2-oxazole-4-sulfonamide
Authors:Liu, F, Shoichet, B.K.
Deposit date:2024-06-11
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C84
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X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: 3,5-dichloro-N-(8-fluoroisoquinolin-5-yl)-2-hydroxybenzene-1-sulfonamide, AmpC Beta-lactamase
Authors:Liu, F, Shoichet, B.K.
Deposit date:2024-06-12
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9C8J
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BU of 9c8j by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: AmpC Beta-lactamase, N-(1-acetyl-2,3-dihydro-1H-indol-4-yl)-3-chloro-2-hydroxybenzene-1-sulfonamide
Authors:Liu, F, Shoichet, B.K.
Deposit date:2024-06-12
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
To Be Published
9EMA
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RUVBL1/2 in complex with ATP and CB-6644 inhibitor
Descriptor: 5-chloranyl-2-ethoxy-4-fluoranyl-~{N}-[4-[[3-(methoxymethyl)-1-oxidanylidene-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2]benzodiazepin-2-yl]amino]-2,2-dimethyl-4-oxidanylidene-butyl]benzamide, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
Deposit date:2024-03-07
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
9EN6
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Crystal structure of RNA G2C4 repeats - native model pH 6.5
Descriptor: MAGNESIUM ION, RNA (5'-R(*GP*GP*CP*CP*CP*C)-3')
Authors:Mateja-Pluta, M, Kiliszek, A.
Deposit date:2024-03-12
Release date:2024-05-01
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (0.918 Å)
Cite:Antisense RNA C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms a triplex-like structure and binds small synthetic ligand.
Nucleic Acids Res., 52, 2024
9ENZ
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X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure A)
Descriptor: ACETATE ION, AMMONIA, Lysozyme C, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO0
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BU of 9eo0 by Molmil
Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1
Descriptor: Programmed cell death 1 ligand 1, SULFATE ION, ~{N}-[3-[3-[[5-[(2-hydroxyethylamino)methyl]pyridin-2-yl]carbonylamino]-2-methyl-phenyl]-2-methyl-phenyl]-5-[[3-(methylsulfonylamino)propylamino]methyl]pyridine-2-carboxamide
Authors:Plewka, J, Hec, A, Sitar, T, Holak, T.
Deposit date:2024-03-14
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Nonsymmetrically Substituted 1,1'-Biphenyl-Based Small Molecule Inhibitors of the PD-1/PD-L1 Interaction.
Acs Med.Chem.Lett., 15, 2024
9EO2
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BU of 9eo2 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure B)
Descriptor: ACETATE ION, GLYCEROL, Lysozyme C, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO5
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X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure C)
Descriptor: AMMONIA, PLATINUM (II) ION, Ribonuclease pancreatic
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO8
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BU of 9eo8 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure D)
Descriptor: AMMONIA, CHLORIDE ION, PLATINUM (II) ION, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EOJ
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BU of 9eoj by Molmil
Vertebrate microtubule-capping gamma-tubulin ring complex
Descriptor: Gamma-tubulin complex component, Gamma-tubulin complex component 3 homolog, Gamma-tubulin complex component 6, ...
Authors:Vermeulen, B.J.A, Pfeffer, S.
Deposit date:2024-03-15
Release date:2024-04-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (17 Å)
Cite:gamma-TuRC asymmetry induces local protofilament mismatch at the RanGTP-stimulated microtubule minus end.
Embo J., 43, 2024
9EOU
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BU of 9eou by Molmil
Crystal Structure of the b1b2 domains from Human Neuropilin-1 in complex with a peptide.
Descriptor: Neuropilin-1, Osteopontin
Authors:Caing-Carlsson, R, Duelli, A, Walse, B.
Deposit date:2024-03-15
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification of an osteopontin-derived peptide that binds neuropilin-1 and activates vascular repair responses and angiogenesis.
Pharmacol Res, 205, 2024
9EPV
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BU of 9epv by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
Descriptor: 1,2-ETHANEDIOL, 5-[[2-[(3-chloranyl-4-phenyl-phenyl)methylamino]-7-azaspiro[3.5]nonan-7-yl]sulfonyl]-1,3-dimethyl-benzimidazol-2-one, Casein kinase II subunit alpha, ...
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC333
To Be Published
9EPW
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3336
Descriptor: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-2-[1-(3-methylquinolin-8-yl)sulfonylpiperidin-4-yl]ethanamine
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3336
To Be Published
9EPX
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
Descriptor: 1,2-ETHANEDIOL, 7-[(2-chloranyl-1,3-benzothiazol-6-yl)sulfonyl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]-7-azaspiro[3.5]nonan-2-amine, Casein kinase II subunit alpha, ...
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3331
To Be Published
9EPY
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BU of 9epy by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3330
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION, ...
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3330
To Be Published
9EPZ
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3337
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION, ...
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGC3337
To Be Published
9EQ0
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJG12
Descriptor: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[4-[(3-chloranyl-4-phenyl-phenyl)methylamino]butyl]isoquinoline-5-sulfonamide
Authors:Kraemer, A, Greco, F, Gerninghaus, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJG12
To Be Published
9EQ1
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Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJM24
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION, ...
Authors:Kraemer, A, Greco, F, Moeckel, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-03-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric ligand FGJM24
To Be Published
9EQ3
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Structure of IgE HMM5 bound to FceRIa cryo-EM class 8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, ...
Authors:Andersen, G.R, Jensen, R.K.
Deposit date:2024-03-20
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of IgE HMM5 bound to FceRIa cryo-EM class 8
To be published
9EQ4
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Structure of IgE HMM5 bound to FceRIa cryo-EM class 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, ...
Authors:Andersen, G.R, Jensen, R.K.
Deposit date:2024-03-20
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Structure of IgE HMM5 bound to FceRIa cryo-EM class 5
To be published

222415

數據於2024-07-10公開中

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