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Legacy flatfile-incompatible PDB entries
7EIZ
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BU of 7eiz by Molmil
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Descriptor: Helicase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Yan, L, Yang, Y.X, Li, M.Y, Zhang, Y, Zheng, L.T, Ge, J, Huang, Y.C, Liu, Z.Y, Wang, T, Gao, S, Zhang, R, Huang, Y.Y, Guddat, L.W, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2021-04-01
Release date:2021-09-22
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY
Cite:Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Cell, 184, 2021
7ELH
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BU of 7elh by Molmil
In situ structure of transcriptional enzyme complex and capsid shell protein of mammalian reovirus at initiation state
Descriptor: Lambda 1, Minor core protein mu2, PHOSPHATE ION, ...
Authors:Zhou, Z.H, Pan, M.
Deposit date:2021-04-11
Release date:2021-10-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Asymmetric reconstruction of mammalian reovirus reveals interactions among RNA, transcriptional factor mu2 and capsid proteins.
Nat Commun, 12, 2021
7ENA
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BU of 7ena by Molmil
TFIID-based PIC-Mediator holo-complex in pre-assembled state (pre-hPIC-MED)
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Qi, Y, Wang, X, Wu, Z, Yin, X, Li, J, Liu, W, Xu, Y.
Deposit date:2021-04-16
Release date:2021-05-26
Last modified:2021-06-16
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Structures of the human Mediator and Mediator-bound preinitiation complex.
Science, 372, 2021
7ENC
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BU of 7enc by Molmil
TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED)
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Chen, X, Qi, Y, Wang, X, Wu, Z, Yin, X, Li, J, Liu, W, Xu, Y.
Deposit date:2021-04-16
Release date:2021-05-26
Last modified:2021-06-16
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:Structures of the human Mediator and Mediator-bound preinitiation complex.
Science, 372, 2021
7EQ9
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BU of 7eq9 by Molmil
Cryo-EM structure of designed protein nanoparticle TIP60 (Truncated Icosahedral Protein composed of 60-mer fusion proteins)
Descriptor: TIP60
Authors:Obata, J, Kawakami, N, Tsutsumi, A, Miyamoto, K, Kikkawa, M, Arai, R.
Deposit date:2021-04-30
Release date:2021-09-15
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Icosahedral 60-meric porous structure of designed supramolecular protein nanoparticle TIP60.
Chem.Commun.(Camb.), 57, 2021
7ETJ
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BU of 7etj by Molmil
C5 portal vertex in the partially-enveloped virion capsid
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Li, Z, Yu, X.
Deposit date:2021-05-13
Release date:2021-07-14
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ETO
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BU of 7eto by Molmil
C1 CVSC-binding penton vertex in the virion capsid of Human Cytomegalovirus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Li, Z, Yu, X.
Deposit date:2021-05-13
Release date:2021-07-14
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7EVF
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BU of 7evf by Molmil
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/S213G/W215A
Descriptor: PQQ_3 domain-containing protein
Authors:Kim, J, Ha, N.-C.
Deposit date:2021-05-21
Release date:2022-01-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the plant growth-promoting factor YxaL from the rhizobacterium Bacillus velezensis and its application to protein engineering.
Acta Crystallogr D Struct Biol, 78, 2022
7EW5
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BU of 7ew5 by Molmil
immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5
Descriptor: Heavy chain of 13H5, Light chain of 13H5, Major capsid protein L1
Authors:Wang, Z.P, Wang, D.N, Gu, Y, Li, S.W.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.606 Å)
Cite:structure of HPV6 L1 pentamer in complex with neutralizing antibody 13H5
To Be Published
7EXT
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BU of 7ext by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta subunit, Allophycocyanin subunit alpha-B, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-28
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
7EY0
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BU of 7ey0 by Molmil
Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-813 Fab and BD-744 Fab
Descriptor: BD-744H, BD-744L, BD-813H, ...
Authors:Du, S, Xiao, J.
Deposit date:2021-05-29
Release date:2021-09-08
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of SARS-CoV-2 B.1.351 neutralizing antibodies provide insights into cocktail design against concerning variants.
Cell Res., 31, 2021
7EY4
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BU of 7ey4 by Molmil
Local CryoEM of the SARS-CoV-2 S6PV2 in complex with BD-667
Descriptor: BD-667 H, BD-667 L, Spike glycoprotein, ...
Authors:Liu, P.L.
Deposit date:2021-05-29
Release date:2021-09-08
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Structures of SARS-CoV-2 B.1.351 neutralizing antibodies provide insights into cocktail design against concerning variants.
Cell Res., 31, 2021
7EYD
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BU of 7eyd by Molmil
Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Descriptor: Allophycocyanin subunit alpha 1, Allophycocyanin subunit alpha-B, Allophycocyanin subunit beta, ...
Authors:Zheng, L, Zheng, Z, Li, X, Wang, G, Zhang, K, Wei, P, Zhao, J, Gao, N.
Deposit date:2021-05-30
Release date:2021-10-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insight into the mechanism of energy transfer in cyanobacterial phycobilisomes.
Nat Commun, 12, 2021
7EZX
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BU of 7ezx by Molmil
Structure of the phycobilisome from the red alga Porphyridium purpureum in Middle Light
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
Authors:Ma, J.F, Sui, S.-F.
Deposit date:2021-06-02
Release date:2022-09-28
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The structural basis for light acclimation in phycobilisome light harvesting systems systems in Porphyridium purpureum
Commun Biol, 6, 2023
7F25
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BU of 7f25 by Molmil
Crystal structure of SSB from Salmonella enterica serovar Typhimurium LT2.
Descriptor: Single-stranded DNA-binding protein 1
Authors:Luo, R.H, Huang, Y.H, Huang, C.Y.
Deposit date:2021-06-10
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Crystal Structure of an SSB Protein from Salmonella enterica and Its Inhibition by Flavanonol Taxifolin.
Int J Mol Sci, 23, 2022
7F2N
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BU of 7f2n by Molmil
Crystal structure of SSB from Klebsiella pneumonia.
Descriptor: Single-stranded DNA-binding protein
Authors:Lin, E.S, Huang, Y.H, Huang, C.Y.
Deposit date:2021-06-11
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Characterization of the Chimeric PriB-SSBc Protein.
Int J Mol Sci, 22, 2021
7F4V
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BU of 7f4v by Molmil
Cryo-EM structure of a primordial cyanobacterial photosystem I
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kato, K, Hamaguchi, T, Nagao, R, Kawakami, K, Yonekura, K, Shen, J.R.
Deposit date:2021-06-21
Release date:2022-04-06
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Structural basis for the absence of low-energy chlorophylls responsible for photoprotection from a primitive cyanobacterial PSI
Biorxiv, 2022
7F5S
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BU of 7f5s by Molmil
human delta-METTL18 60S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Takahashi, M, Kashiwagi, K, Ito, T.
Deposit date:2021-06-22
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:METTL18-mediated histidine methylation of RPL3 modulates translation elongation for proteostasis maintenance.
Elife, 11, 2022
7F8I
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BU of 7f8i by Molmil
Crystal structure of HPV6 L1 pentamer
Descriptor: Major capsid protein L1
Authors:Wang, Z.P, Wang, D.N, Gu, Y, Li, S.W.
Deposit date:2021-07-02
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.366 Å)
Cite:Crystal structure of HPV6 L1 pentamer
To Be Published
7F9O
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BU of 7f9o by Molmil
PSI-NDH supercomplex of Barley
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Wang, W.D, Shen, L, Tang, K, Han, G.Y, Shen, J.R, Zhang, X.
Deposit date:2021-07-04
Release date:2021-12-22
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7FB1
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BU of 7fb1 by Molmil
SARS-CoV-2 spike protein in one-RBD open state
Descriptor: Spike glycoprotein
Authors:Zhu, Y, Tai, L.H, Sun, F.
Deposit date:2021-07-08
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Novel sites for Cathepsin L cleavage in SARS-CoV-2 spike guide treatment strategies
To Be Published
7FCF
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BU of 7fcf by Molmil
Crystal structure of T6SS Hcp protein
Descriptor: Fimbrial protein
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2021-07-14
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bacterial antagonism of Chromobacterium haemolyticum and characterization of its putative type VI secretion system.
Res.Microbiol., 173, 2022
7FF7
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BU of 7ff7 by Molmil
Structure of OmpF2
Descriptor: Outer membrane protein F, ZINC ION
Authors:Jeong, W.J, Song, W.J.
Deposit date:2021-07-22
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Design and directed evolution of noncanonical beta-stereoselective metalloglycosidases.
Nat Commun, 13, 2022
7FFE
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BU of 7ffe by Molmil
Cryo-EM structure of VEEV VLP
Descriptor: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021
7FFF
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BU of 7fff by Molmil
Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3
Descriptor: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021

222415

数据于2024-07-10公开中

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