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Legacy flatfile-incompatible PDB entries
7MOQ
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BU of 7moq by Molmil
The structure of the Tetrahymena thermophila outer dynein arm on doublet microtubule
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Docking complex 1 protein, ...
Authors:Kubo, S, Yang, S.K, Ichikawa, M, Bui, K.H.
Deposit date:2021-05-03
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Remodeling and activation mechanisms of outer arm dyneins revealed by cryo-EM.
Embo Rep., 22, 2021
7MPI
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BU of 7mpi by Molmil
Stm1 bound vacant 80S structure isolated from cbf5-D95A
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Rai, J, Zhao, Y, Li, H.
Deposit date:2021-05-04
Release date:2022-05-11
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations.
Structure, 30, 2022
7MPJ
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BU of 7mpj by Molmil
Stm1 bound vacant 80S structure isolated from wild-type
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Rai, J, Zhao, Y, Li, H.
Deposit date:2021-05-04
Release date:2022-05-11
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations.
Structure, 30, 2022
7MQ8
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BU of 7mq8 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MQ9
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BU of 7mq9 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1*
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MQA
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BU of 7mqa by Molmil
Cryo-EM structure of the human SSU processome, state post-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MQT
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BU of 7mqt by Molmil
N-Acetylmannosamine-6-phosphate 2-epimerase from Staphylococcus aureus (strain MRSA USA300) with 5-deoxy substrate bound
Descriptor: 2-acetamido-2,5-dideoxy-6-O-phosphono-D-lyxo-hexose, CHLORIDE ION, CITRIC ACID, ...
Authors:Currie, M.J, Dobson, R.C.J.
Deposit date:2021-05-06
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:N-acetylmannosamine-6-phosphate 2-epimerase uses a novel substrate-assisted mechanism to catalyze amino sugar epimerization.
J.Biol.Chem., 297, 2021
7MSC
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BU of 7msc by Molmil
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-11
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MSH
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BU of 7msh by Molmil
Mtb 70SIC in complex with MtbEttA at Pre_R1 state
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-11
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MSM
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BU of 7msm by Molmil
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-11
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MSZ
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BU of 7msz by Molmil
Mtb 70SIC in complex with MtbEttA at Trans_R1 state
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-12
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MT0
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BU of 7mt0 by Molmil
Structure of the adeno-associated virus 9 capsid at pH 7.4
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-12
Release date:2021-06-02
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MT2
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BU of 7mt2 by Molmil
Mtb 70S initiation complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-12
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MT3
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BU of 7mt3 by Molmil
Mtb 70S with P/E tRNA
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-12
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MT7
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BU of 7mt7 by Molmil
Mtb 70S with P and E site tRNAs
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Cui, Z, Zhang, J.
Deposit date:2021-05-13
Release date:2022-02-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis.
Nat Commun, 13, 2022
7MTG
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BU of 7mtg by Molmil
Structure of the adeno-associated virus 9 capsid at pH 6.0
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTP
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BU of 7mtp by Molmil
Structure of the adeno-associated virus 9 capsid at pH 5.5
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTW
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BU of 7mtw by Molmil
Structure of the adeno-associated virus 9 capsid at pH 4.0
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTZ
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BU of 7mtz by Molmil
Structure of the adeno-associated virus 9 capsid at pH pH 7.4 in complex with terminal galactose
Descriptor: Capsid protein VP1, beta-D-galactopyranose
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-14
Release date:2021-06-09
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MU6
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BU of 7mu6 by Molmil
Ask1 bound to compound 28
Descriptor: 2-methoxy-N-(6-{4-[(2S)-1,1,1-trifluoropropan-2-yl]-4H-1,2,4-triazol-3-yl}pyridin-2-yl)pyridine-3-carboxamide, Mitogen-activated protein kinase kinase kinase 5
Authors:Chodaparambil, J.V, Marcotte, D.J.
Deposit date:2021-05-14
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.165 Å)
Cite:Discovery of Potent, Selective, and Brain-Penetrant Apoptosis Signal-Regulating Kinase 1 (ASK1) Inhibitors that Modulate Brain Inflammation In Vivo.
J.Med.Chem., 64, 2021
7MUA
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BU of 7mua by Molmil
Structure of the adeno-associated virus 9 capsid at pH pH 5.5 in complex with terminal galactose
Descriptor: Capsid protein VP1, beta-D-galactopyranose
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-14
Release date:2021-06-09
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MUC
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BU of 7muc by Molmil
Legionella pneumophila Dot/Icm T4SS C1 Reconstruction
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUD
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BU of 7mud by Molmil
Legionella pneumophila Dot/Icm T4SS OMC
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUE
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BU of 7mue by Molmil
Legionella pneumophila Dot/Icm T4SS PR
Descriptor: DotF, IcmE protein, Type IV secretion protein IcmK, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021
7MUQ
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BU of 7muq by Molmil
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 1
Descriptor: DUF2807 domain-containing protein, DotC, DotD, ...
Authors:Sheedlo, M.J, Durie, C.L, Swanson, M, Lacy, D.B, Ohi, M.D.
Deposit date:2021-05-14
Release date:2021-10-06
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM reveals new species-specific proteins and symmetry elements in the Legionella pneumophila Dot/Icm T4SS.
Elife, 10, 2021

238582

数据于2025-07-09公开中

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