Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
7A5H
DownloadVisualize
BU of 7a5h by Molmil
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A5I
DownloadVisualize
BU of 7a5i by Molmil
Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A5J
DownloadVisualize
BU of 7a5j by Molmil
Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A5K
DownloadVisualize
BU of 7a5k by Molmil
Structure of the human mitoribosome in the post translocation state bound to mtEF-G1
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V.
登録日2020-08-21
公開日2020-12-23
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Elongational stalling activates mitoribosome-associated quality control.
Science, 370, 2020
7A6W
DownloadVisualize
BU of 7a6w by Molmil
Structure of the FKBP51FK1 domain in complex with the macrocyclic SAFit analogue 33-(Z)
分子名称: (2S,9S,12R,20Z)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-28,31-dimethoxy-11,18,23,26-tetraoxa-4-azatetracyclo[25.2.2.113,17.04,9]dotriaconta-1(29),13(32),14,16,20,27,30-heptaene-3,10-dione, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Bauder, M, Meyners, C, Purder, P, Merz, S, Voll, A, Heymann, T, Hausch, F.
登録日2020-08-27
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-Based Design of High-Affinity Macrocyclic FKBP51 Inhibitors.
J.Med.Chem., 64, 2021
7A6X
DownloadVisualize
BU of 7a6x by Molmil
Structure of the FKBP51FK1 domain in complex with the macrocyclic SAFit analogue 56
分子名称: (2S,9S,12R)-2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-24,27-dimethoxy-11,18,22-trioxa-4-azatetracyclo[21.2.2.113,17.04,9]octacosa-1(25),13(28),14,16,23,26-hexaene-3,10-dione, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Bauder, M, Meyners, C, Purder, P, Merz, S, Voll, A, Heymann, T, Hausch, F.
登録日2020-08-27
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure-Based Design of High-Affinity Macrocyclic FKBP51 Inhibitors.
J.Med.Chem., 64, 2021
7A7D
DownloadVisualize
BU of 7a7d by Molmil
Cadherin fit into cryo-ET map
分子名称: Desmocollin-2, Desmoglein-2
著者Sikora, M, Ermel, U.H, Seybold, A, Kunz, M, Calloni, G, Reitz, J, Vabulas, R.M, Hummer, G, Frangakis, A.S.
登録日2020-08-28
公開日2020-12-23
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (26 Å)
主引用文献Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography.
Proc.Natl.Acad.Sci.USA, 117, 2020
7A8W
DownloadVisualize
BU of 7a8w by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikC with an engineered HMA domain of Pikp-1 from rice (Oryza sativa)
分子名称: NBS-LRR class disease resistance protein, Uncharacterized protein
著者Maidment, J.H.R, De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
登録日2020-08-31
公開日2021-03-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface.
Plos Pathog., 17, 2021
7A8Y
DownloadVisualize
BU of 7a8y by Molmil
X-ray crystal structure of Aspartate alpha-decarboxylase in complex with D-Serine
分子名称: 1,2-ETHANEDIOL, Aspartate 1-decarboxylase, D-SERINE, ...
著者Yorke, B.A, Raskar, T.
登録日2020-08-31
公開日2021-10-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and diffusive dynamics of aspartate alpha-decarboxylase (ADC) liganded with D-serine in aqueous solution.
Phys Chem Chem Phys, 2022
7A9C
DownloadVisualize
BU of 7a9c by Molmil
Human serum albumin (HSA) crystallized in the presence of yttrium (III) chloride
分子名称: Albumin, YTTRIUM (III) ION
著者Zocher, G, Stehle, T.
登録日2020-09-01
公開日2021-06-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Protein Crystallization in the Presence of a Metastable Liquid-Liquid Phase Separation
Cryst.Growth Des., 2020
7A9G
DownloadVisualize
BU of 7a9g by Molmil
Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Mycobacterium tuberculosis with intermediate 2-acetyl-thiamine diphosphate
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase,1-deoxy-D-xylulose-5-phosphate synthase, 2-ACETYL-THIAMINE DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Gierse, R.M, Reddem, E, Grooves, M.R.
登録日2020-09-02
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献First crystal structures of 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis indicate a distinct mechanism of intermediate stabilization.
Sci Rep, 12, 2022
7A9H
DownloadVisualize
BU of 7a9h by Molmil
Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Mycobacterium tuberculosis
分子名称: 1-deoxy-D-xylulose-5-phosphate synthase,1-deoxy-D-xylulose-5-phosphate synthase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
著者Gierse, R.M, Reddem, E, Grooves, M.R.
登録日2020-09-02
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献First crystal structures of 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis indicate a distinct mechanism of intermediate stabilization.
Sci Rep, 12, 2022
7A9U
DownloadVisualize
BU of 7a9u by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 3-(3-(but-3-yn-1-yl)-3H-diazirin-3-yl)-N-(3-methyl-[1,2,4]triazolo[4,3-a]pyridin-8-yl)propanamide
分子名称: 1,2-ETHANEDIOL, 3-(3-(but-3-yn-1-yl)-3H-diazirin-3-yl)-N-(3-methyl-[1,2,4]triazolo[4,3-a]pyridin-8-yl)propanamide, Bromodomain-containing protein 4
著者Chung, C.
登録日2020-09-02
公開日2020-10-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.444 Å)
主引用文献A Photoaffinity-Based Fragment-Screening Platform for Efficient Identification of Protein Ligands.
Angew.Chem.Int.Ed.Engl., 59, 2020
7A9Y
DownloadVisualize
BU of 7a9y by Molmil
Structural comparison of cellular retinoic acid binding protein I and II in the presence and absence of natural and synthetic ligands
分子名称: Cellular retinoic acid-binding protein 1, GLYCEROL, MYRISTIC ACID, ...
著者Tomlinson, C.W.E, Cornish, K.A.S, Pohl, E.
登録日2020-09-02
公開日2021-02-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structure-functional relationship of cellular retinoic acid-binding proteins I and II interacting with natural and synthetic ligands.
Acta Crystallogr D Struct Biol, 77, 2021
7A9Z
DownloadVisualize
BU of 7a9z by Molmil
Structural comparison of cellular retinoic acid binding protein I and II in the presence and absence of natural and synthetic ligands
分子名称: 4-[2-(5,5,8,8-tetramethyl-6,7-dihydroquinoxalin-2-yl)ethynyl]benzoic acid, Cellular retinoic acid-binding protein 1
著者Tomlinson, C.W.E, Cornish, K.A.S, Pohl, E.
登録日2020-09-02
公開日2021-02-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structure-functional relationship of cellular retinoic acid-binding proteins I and II interacting with natural and synthetic ligands.
Acta Crystallogr D Struct Biol, 77, 2021
7AA0
DownloadVisualize
BU of 7aa0 by Molmil
Structural comparison of cellular retinoic acid binding protein I and II in the presence and absence of natural and synthetic ligands
分子名称: (~{E})-3-[4-(4,4-dimethyl-1-propan-2-yl-2,3-dihydroquinolin-6-yl)phenyl]prop-2-enoic acid, Cellular retinoic acid-binding protein 2
著者Tomlinson, C.W.E, Cornish, K.A.S, Pohl, E.
登録日2020-09-02
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure-functional relationship of cellular retinoic acid-binding proteins I and II interacting with natural and synthetic ligands.
Acta Crystallogr D Struct Biol, 77, 2021
7AA1
DownloadVisualize
BU of 7aa1 by Molmil
Structural comparison of cellular retinoic acid binding proteins I and II in the presence and absence of natural and synthetic ligands
分子名称: 4-[2-(5,5,8,8-tetramethyl-6,7-dihydroquinoxalin-2-yl)ethynyl]benzoic acid, Cellular retinoic acid-binding protein 2
著者Tomlinson, C.W.E, Cornish, K.A.S, Pohl, E.
登録日2020-09-02
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structure-functional relationship of cellular retinoic acid-binding proteins I and II interacting with natural and synthetic ligands.
Acta Crystallogr D Struct Biol, 77, 2021
7AAE
DownloadVisualize
BU of 7aae by Molmil
Crystal structure of Human serum albumin in complex with myristic acid at 2.27 Angstrom Resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Albumin, FORMIC ACID, ...
著者Maso, L, Liberi, S, Trande, M, Angelini, A, Cendron, L.
登録日2020-09-04
公開日2021-02-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Unveiling the binding mode of perfluorooctanoic acid to human serum albumin.
Protein Sci., 30, 2021
7AAI
DownloadVisualize
BU of 7aai by Molmil
Crystal structure of Human serum albumin in complex with perfluorooctanoic acid (PFOA) at 2.10 Angstrom Resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
著者Maso, L, Liberi, S, Trande, M, Angelini, A, Cendron, L.
登録日2020-09-04
公開日2021-02-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Unveiling the binding mode of perfluorooctanoic acid to human serum albumin.
Protein Sci., 30, 2021
7ABF
DownloadVisualize
BU of 7abf by Molmil
Human pre-Bact-1 spliceosome core structure
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R.
登録日2020-09-07
公開日2020-12-09
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation.
Science, 370, 2020
7ABG
DownloadVisualize
BU of 7abg by Molmil
Human pre-Bact-1 spliceosome
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Cell division cycle 5-like protein, ...
著者Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R.
登録日2020-09-07
公開日2020-12-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation.
Science, 370, 2020
7ABZ
DownloadVisualize
BU of 7abz by Molmil
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
登録日2020-09-09
公開日2021-08-18
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
7AC0
DownloadVisualize
BU of 7ac0 by Molmil
Epoxide hydrolase CorEH without ligand
分子名称: Soluble epoxide hydrolase
著者Palm, G.J, Lammers, M, Berndt, L.
登録日2020-09-09
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.177 Å)
主引用文献Promiscuous Dehalogenase Activity of the Epoxide Hydrolase CorEH from Corynebacterium sp. C12
Acs Catalysis, 11, 2021
7AC7
DownloadVisualize
BU of 7ac7 by Molmil
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
登録日2020-09-10
公開日2021-08-18
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021
7ACJ
DownloadVisualize
BU of 7acj by Molmil
Structure of translocated trans-translation complex on E. coli stalled ribosome.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R.
登録日2020-09-11
公開日2021-08-18
最終更新日2025-03-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of tmRNA and SmpB as they transit through the ribosome.
Nat Commun, 12, 2021

240681

件を2025-08-20に公開中

PDB statisticsPDBj update infoContact PDBjnumon