PDB形式変換不可の PDB エントリー

5Z56	cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y. 登録日 2018-01-17 公開日 2018-09-19 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (5.1 Å) 主引用文献 Structure of the human activated spliceosome in three conformational states. Cell Res., 28, 2018
5Z57	Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ALANINE, BUD13 homolog, ... 著者 Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y. 登録日 2018-01-17 公開日 2018-09-19 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (6.5 Å) 主引用文献 Structure of the human activated spliceosome in three conformational states. Cell Res., 28, 2018
5ZAP	Atomic structure of the herpes simplex virus type 2 B-capsid 分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ... 著者 Yuan, S, Wang, J.L, Zhu, D.J, Wang, N, Gao, Q, Chen, W.Y, Tang, H, Wang, J.Z, Zhang, X.Z, Liu, H.R, Rao, Z.H, Wang, X.X. 登録日 2018-02-08 公開日 2018-04-18 最終更新日 2018-09-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Cryo-EM structure of a herpesvirus capsid at 3.1 angstrom. Science, 360, 2018
5ZEB	M. Smegmatis P/P state 70S ribosome structure 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Mishra, S, Ahmed, T, Tyagi, A, Shi, J, Bhushan, S. 登録日 2018-02-27 公開日 2018-09-26 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA. Sci Rep, 8, 2018
5ZEP	M. smegmatis hibernating state 70S ribosome structure 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Mishra, S, Ahmed, T, Tyagi, A, Shi, J, Bhushan, S. 登録日 2018-02-27 公開日 2018-09-26 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA. Sci Rep, 8, 2018
5ZF0	X-ray Structure of the Electron Transfer Complex between Ferredoxin and Photosystem I 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kubota-Kawai, H, Mutoh, R, Shinmura, K, Setif, P, Nowaczyk, M, Roegner, M, Ikegami, T, Tanaka, T, Kurisu, G. 登録日 2018-03-01 公開日 2018-04-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 X-ray structure of an asymmetrical trimeric ferredoxin-photosystem I complex Nat Plants, 4, 2018
5ZLU	Ribosome Structure bound to ABC-F protein. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Su, W.X, Kumar, V, Ero, R, Andrew, S.W.W, Jian, S, Yong-Gui, G. 登録日 2018-03-29 公開日 2018-08-01 最終更新日 2019-12-04 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Ribosome protection by antibiotic resistance ATP-binding cassette protein. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ZWM	Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part) 分子名称: 13 kDa ribonucleoprotein-associated protein, 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component, Cold sensitive U2 snRNA suppressor 1, ... 著者 Bai, R, Wan, R, Yan, C, Lei, J, Shi, Y. 登録日 2018-05-16 公開日 2018-08-29 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of the fully assembledSaccharomyces cerevisiaespliceosome before activation Science, 360, 2018
5ZZ8	Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component 分子名称: Major capsid protein, UL17, UL25, ... 著者 Wang, J.L, Yuan, S, Zhu, D.J, Tang, H, Wang, N, Chen, W.Y, Gao, Q, Li, Y.H, Wang, J.Z, Liu, H.R, Zhang, X.Z, Rao, Z.H, Wang, X.X. 登録日 2018-05-31 公開日 2018-10-10 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.75 Å) 主引用文献 Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component. Nat Commun, 9, 2018
6AHD	The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase, ... 著者 Zhan, X, Yan, C, Zhang, X, Shi, Y. 登録日 2018-08-17 公開日 2018-11-14 最終更新日 2021-06-30 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structures of the human pre-catalytic spliceosome and its precursor spliceosome. Cell Res., 28, 2018
6AWB	Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWC	Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWD	Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AZ3	Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin 分子名称: 60S ribosomal protein L10, putative, 60S ribosomal protein L11 (L5, ... 著者 Shalev-Benami, M, Zhang, Y, Rozenberg, H, Nobe, Y, Taoka, M, Matzov, D, Zimmerman, E, Bashan, A, Isobe, T, Jaffe, C.L, Yonath, A, Skiniotis, G. 登録日 2017-09-09 公開日 2017-12-06 最終更新日 2022-04-13 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin. Nat Commun, 8, 2017
6AZW	IDO1/FXB-001116 crystal structure 分子名称: (2R)-N-(4-cyanophenyl)-2-[cis-4-(quinolin-4-yl)cyclohexyl]propanamide, Indoleamine 2,3-dioxygenase 1 著者 Lewis, H.A, Lammens, A, Steinbacher, S. 登録日 2017-09-13 公開日 2018-03-21 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6B1T	Improved cryoEM structure of human adenovirus type 5 with atomic details of minor proteins VI and VII 分子名称: Hexon protein, Hexon-interlacing protein, Penton protein, ... 著者 Dai, X.H, Wu, L, Sun, R, Zhou, Z.H. 登録日 2017-09-18 公開日 2017-09-27 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Atomic Structures of Minor Proteins VI and VII in Human Adenovirus. J. Virol., 91, 2017
6B43	CryoEM structure and atomic model of the Kaposi's sarcoma-associated herpesvirus capsid 分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ... 著者 Dai, X.H, Gong, D.Y, Sun, R, Zhou, Z.H. 登録日 2017-09-25 公開日 2017-11-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structure and mutagenesis reveal essential capsid protein interactions for KSHV replication. Nature, 553, 2018
6B4V	Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2017-09-27 公開日 2018-02-07 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Mechanism of Inhibition of Translation Termination by Blasticidin S. J. Mol. Biol., 430, 2018
6B9Q	Single particle cryo-EM structure determination of the LuIII capsid protein 分子名称: Capsid protein VP2 著者 Pittman, N.C, Agbandje-McKenna, M. 登録日 2017-10-11 公開日 2017-11-15 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.17 Å) 主引用文献 Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction. Viruses, 9, 2017
6BBF	The CRAC channel Orai in an open conformation; H206A gain-of-function mutation 分子名称: Calcium release-activated calcium channel protein 1 著者 Long, S.B, Hou, X, Burstein, S. 登録日 2017-10-18 公開日 2018-09-12 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (6.706 Å) 主引用文献 Structures reveal opening of the store-operated calcium channel Orai. Elife, 7, 2018
6BCU	Cryo-EM structure of the activated RHEB-mTORC1 refined to 3.4 angstrom 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, GTP-binding protein Rheb, ... 著者 Pavletich, N.P, Yang, H. 登録日 2017-10-20 公開日 2017-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40. Nature, 552, 2017
6BCX	mTORC1 structure refined to 3.0 angstroms 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, MAGNESIUM ION, ... 著者 Pavletich, N.P, Yang, H. 登録日 2017-10-20 公開日 2017-12-20 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.23 Å) 主引用文献 Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40. Nature, 552, 2017
6BOH	Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2017-11-20 公開日 2018-05-23 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Conformational Control of Translation Termination on the 70S Ribosome. Structure, 26, 2018
6BOK	E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2017-11-20 公開日 2018-05-23 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.55 Å) 主引用文献 Conformational Control of Translation Termination on the 70S Ribosome. Structure, 26, 2018
6BU8	70S ribosome with S1 domains 1 and 2 (Class 1) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 Loveland, A.B, Korostelev, A.A. 登録日 2017-12-08 公開日 2018-01-31 最終更新日 2020-01-01 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural dynamics of protein S1 on the 70S ribosome visualized by ensemble cryo-EM. Methods, 137, 2018

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