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PDB形式変換不可の PDB エントリー
8CDZ
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human carbonic anhydrase I complexed with 4-(3-butylureido)benzenesulfonamide
分子名称: 1-butyl-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, DIMETHYL SULFOXIDE, ...
著者Angeli, A, Ferraroni, M.
登録日2023-02-01
公開日2024-02-21
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Ureidobenzenesulfonamides as Selective Carbonic Anhydrase I, IX, and XII Inhibitors.
Molecules, 28, 2023
8CEH
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BU of 8ceh by Molmil
Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-01
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.05 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CEN
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BU of 8cen by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Schilbach, S, Cramer, P.
登録日2023-02-02
公開日2023-03-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CEO
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BU of 8ceo by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleosome
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Wang, H, Cramer, P.
登録日2023-02-02
公開日2023-03-08
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Yeast PIC-Mediator structure with RNA polymerase II C-terminal domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CF5
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BU of 8cf5 by Molmil
Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-02
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CFZ
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BU of 8cfz by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment H09
分子名称: 1-[2,4-bis(fluoranyl)phenyl]-2-(3,4-dihydro-1,2,4-triazol-2-yl)ethanone, ADENINE, Adenosylhomocysteinase, ...
著者Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
登録日2023-02-03
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry H09
To be published
8CG7
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BU of 8cg7 by Molmil
Structure of p53 cancer mutant Y220C with arylation at Cys182 and Cys277
分子名称: 1,2-ETHANEDIOL, 5-iodanyl-2-methylsulfonyl-pyrimidine, Cellular tumor antigen p53, ...
著者Balourdas, D.I, Pichon, M.M, Baud, M.G.J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2023-02-03
公開日2023-12-13
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structure-Reactivity Studies of 2-Sulfonylpyrimidines Allow Selective Protein Arylation.
Bioconjug.Chem., 34, 2023
8CG8
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Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-03
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CGN
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BU of 8cgn by Molmil
Non-rotated 80S S. cerevisiae ribosome with ligands
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-06
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CH6
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BU of 8ch6 by Molmil
Structure of a late-stage activated spliceosome (BAqr) arrested with a dominant-negative Aquarius mutant (state B complex).
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Cretu, C, Schmitzova, J, Pena, V.
登録日2023-02-07
公開日2023-05-10
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural basis of catalytic activation in human splicing.
Nature, 617, 2023
8CI0
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BU of 8ci0 by Molmil
Maize Transketolase in complex with TPP and hydrolyzed (+)-Cornexistin
分子名称: (1~{Z},3~{R},4~{S},7~{S},8~{Z})-8-ethylidene-4,7-bis(oxidanyl)-5-oxidanylidene-3-propyl-cyclononene-1,2-dicarboxylic acid, 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2H-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, MAGNESIUM ION, ...
著者Freigang, J.
登録日2023-02-08
公開日2023-03-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Investigations into Simplified Analogues of the Herbicidal Natural Product (+)-Cornexistin.
Chemistry, 29, 2023
8CIV
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BU of 8civ by Molmil
Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-10
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CKB
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BU of 8ckb by Molmil
Asymmetric reconstruction of the crAss001 virion
分子名称: Auxiliary capsid protein gp36, Cargo protein 1 gp45, Head fiber dimer protein gp29, ...
著者Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A.
登録日2023-02-16
公開日2023-11-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.39 Å)
主引用文献Structural atlas of the most abundant human gut virus
Nature
8CKU
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BU of 8cku by Molmil
Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-16
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CLK
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BU of 8clk by Molmil
TFIIIC TauA complex
分子名称: General transcription factor 3C polypeptide 1, General transcription factor 3C polypeptide 3, General transcription factor 3C polypeptide 5, ...
著者Seifert-Davila, W, Girbig, M, Hauptmann, L, Hoffmann, T, Eustermann, S, Mueller, C.W.
登録日2023-02-16
公開日2023-06-21
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into human TFIIIC promoter recognition.
Sci Adv, 9, 2023
8CLY
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BU of 8cly by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (tetragonal form R4tP)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Putative L-asparaginase II protein, ...
著者Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imiolczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
登録日2023-02-17
公開日2023-08-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023
8CLZ
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BU of 8clz by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (monoclinic form R4mC-2)
分子名称: CHLORIDE ION, Putative L-asparaginase II protein, ZINC ION
著者Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imiolczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
登録日2023-02-17
公開日2023-08-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023
8CM0
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BU of 8cm0 by Molmil
Rhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Rhs2CT, ...
著者Pankov, G, Hunter, W.N, Coulthurst, S.J.
登録日2023-02-17
公開日2024-08-28
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Rhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2
To Be Published
8CMJ
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BU of 8cmj by Molmil
Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-20
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CMN
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BU of 8cmn by Molmil
18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein
分子名称: DNA-binding protein 7d, N-[2-(2-methyl-1,3-dioxolan-2-yl)phenyl]-2-{[5-(trifluoromethyl)pyridin-2-yl]amino}pyridine-4-carboxamide
著者Deepak, D, Corvaglia, V, Wu, J, Huc, I.
登録日2023-02-20
公開日2023-07-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献18mer DNA mimic Foldamer with an aliphatic linker in complex with Sac7d wild protein
To Be Published
8CMS
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BU of 8cms by Molmil
OTUB2 in covalent complex with LN5P45
分子名称: (1~{S},2~{S})-~{N}'-ethanoyl-2-(3-methylphenyl)cyclopropane-1-carbohydrazide, Ubiquitin thioesterase OTUB2
著者Gan, J, de Vries, J.
登録日2023-02-21
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Cellular Validation of a Chemically Improved Inhibitor Identifies Monoubiquitination on OTUB2.
Acs Chem.Biol., 18, 2023
8CO1
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BU of 8co1 by Molmil
Type II Secretion System
分子名称: IPT/TIG domain-containing protein, Lipoprotein, Probable type IV piliation system protein DR_0774
著者Farci, D, Piano, D.
登録日2023-02-26
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Structural characterization and functional insights into the type II secretion system of the poly-extremophile Deinococcus radiodurans.
J.Biol.Chem., 300, 2024
8CO6
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BU of 8co6 by Molmil
Subtomogram average of Immature Rotavirus TLP penton
分子名称: Inner capsid protein VP2, Intermediate capsid protein VP6, Outer capsid glycoprotein VP7, ...
著者Shah, P.N.M, Stuart, D.I.
登録日2023-02-27
公開日2023-05-10
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Characterization of the rotavirus assembly pathway in situ using cryoelectron tomography.
Cell Host Microbe, 31, 2023
8COA
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BU of 8coa by Molmil
in situ Subtomogram average of Immature Rotavirus TLP spike
分子名称: Intermediate capsid protein VP6, Outer capsid glycoprotein VP7, Outer capsid protein VP4
著者Shah, P.N.M, Stuart, D.I.
登録日2023-02-27
公開日2023-04-05
最終更新日2023-04-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Characterization of the rotavirus assembly pathway in situ using cryoelectron tomography.
Cell Host Microbe, 31, 2023
8COL
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BU of 8col by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (orthorombic form R4oP-2)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imioloczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
登録日2023-02-28
公開日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023

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件を2024-09-11に公開中

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