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PDB形式変換不可の PDB エントリー
7OU1
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Crystal structure of Rhizobium etli inducible L-asparaginase ReAV (monoclinic form MP2)
分子名称: 1,2-ETHANEDIOL, L-asparaginase, ZINC ION
著者Imiolczyk, B, Loch, J.I, Gilski, M, Jaskolski, M.
登録日2021-06-10
公開日2021-11-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the elusive Rhizobium etli L-asparaginase reveal a peculiar active site.
Nat Commun, 12, 2021
7OU6
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Human O-GlcNAc hydrolase in complex with DNJNAc-thiazolidines
分子名称: Protein O-GlcNAcase, ~{N}-[(3~{Z},6~{S},7~{R},8~{R},8~{a}~{S})-7,8-bis(oxidanyl)-3-(phenylmethyl)imino-1,5,6,7,8,8~{a}-hexahydro-[1,3]thiazolo[3,4-a]pyridin-6-yl]ethanamide
著者Males, A, Davies, G.J, Gonzalez-Cuesta, M, Mellet, C.O, Fernandez, J.M.G, Sidhu, P, Ashmus, R, Busmann, J, Vocadlo, D.J, Foster, L.
登録日2021-06-11
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Bicyclic Picomolar OGA Inhibitors Enable Chemoproteomic Mapping of Its Endogenous Post-translational Modifications
J.Am.Chem.Soc., 144, 2022
7OU8
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Human O-GlcNAc hydrolase in complex with DNJNAc-thiazolidines
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, O-GlcNAcase BT_4395, ...
著者Males, A, Davies, G.J, Gonzalez-Cuesta, M, Mellet, C.O, Fernandez, J.M.G, Sidhu, P, Ashmus, R, Busmann, J, Vocadlo, D.J, Foster, L.
登録日2021-06-11
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Bicyclic Picomolar OGA Inhibitors Enable Chemoproteomic Mapping of Its Endogenous Post-translational Modifications
J.Am.Chem.Soc., 144, 2022
7OUC
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BU of 7ouc by Molmil
Crystal structure of the flavoprotein monooxygenase GrhO5 from griseorhodin A biosynthesis
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent monooxygenase GrhO5
著者Saleem-Batcha, R, Toplak, M, Teufel, R.
登録日2021-06-11
公開日2021-11-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Catalytic Control of Spiroketal Formation in Rubromycin Polyketide Biosynthesis.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OUD
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BU of 7oud by Molmil
Crystal structure of a ternary complex of the flavoprotein monooxygenase GrhO5 with FAD and collinone
分子名称: Collinone, FAD-dependent monooxygenase GrhO5, FLAVIN-ADENINE DINUCLEOTIDE
著者Saleem-Batcha, R, Toplak, M, Teufel, R.
登録日2021-06-11
公開日2021-11-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Catalytic Control of Spiroketal Formation in Rubromycin Polyketide Biosynthesis.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OUJ
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BU of 7ouj by Molmil
Crystal structure of the flavoprotein monooxygenase RubL from rubromycin biosynthesis
分子名称: (2S)-hexane-1,2,6-triol, 4-HYDROXYPROLINE, CHLORIDE ION, ...
著者Saleem-Batcha, R, Toplak, M, Teufel, R.
登録日2021-06-11
公開日2021-11-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.573 Å)
主引用文献Catalytic Control of Spiroketal Formation in Rubromycin Polyketide Biosynthesis.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OUO
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Crystal structure of RNA duplex [UCGUGCGA]2 in complex with Ba2+ cation
分子名称: BARIUM ION, RNA (5'-R(*UP*CP*GP*UP*GP*CP*GP*A)-3')
著者Ruszkowski, M, Mao, S, Zheng, Y.Y, Ruszkowska, A, Sheng, J.
登録日2021-06-12
公開日2022-03-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.212 Å)
主引用文献Structural Insights Into the 5'UG/3'GU Wobble Tandem in Complex With Ba 2+ Cation.
Front Mol Biosci, 8, 2021
7OVA
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Crystal structure of an AA9 LPMO
分子名称: (2S)-2-hydroxybutanedioic acid, COPPER (II) ION, Endoglucanase, ...
著者Males, A, Correa, T.L.R, Murakami, M.T, Walton, P.H, Davies, G.J.
登録日2021-06-14
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of an AA9 LPMO
To Be Published
7OVW
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BU of 7ovw by Molmil
Binding domain of botulinum neurotoxin E in complex with GD1a
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Neurotoxin type E
著者Masuyer, G, Stenmark, P.
登録日2021-06-15
公開日2021-08-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of Ganglioside Receptor Recognition by Botulinum Neurotoxin Serotype E.
Int J Mol Sci, 22, 2021
7OW7
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BU of 7ow7 by Molmil
EIF6-bound large subunit of the human ribosome
分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S rRNA, ...
著者Faille, A, Warren, A.J.
登録日2021-06-16
公開日2022-10-05
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of human EIF6-bound large ribosomal subunit
To Be Published
7OXP
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BU of 7oxp by Molmil
Cryo-EM structure of yeast Sei1
分子名称: BJ4_G0032880.mRNA.1.CDS.1,BJ4_G0032880.mRNA.1.CDS.1
著者Deme, J.C, Lea, S.M.
登録日2021-06-22
公開日2021-10-13
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex.
Nat Commun, 12, 2021
7OXR
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Cryo-EM structure of yeast Sei1 with locking helix deletion
分子名称: BJ4_G0032880.mRNA.1.CDS.1
著者Deme, J.C, Lea, S.M.
登録日2021-06-22
公開日2021-10-13
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex.
Nat Commun, 12, 2021
7OYA
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BU of 7oya by Molmil
Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYB
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BU of 7oyb by Molmil
Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYC
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BU of 7oyc by Molmil
Cryo-EM structure of the Xenopus egg 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-20
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYD
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BU of 7oyd by Molmil
Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYK
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BU of 7oyk by Molmil
DNA-binding domain of CggR in complex with the DNA operator
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Central glycolytic genes regulator, ...
著者Novakova, M, Rezacova, P, Skerlova, J, Brynda, J.
登録日2021-06-24
公開日2021-11-10
最終更新日2021-11-24
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Structural insight into DNA recognition by bacterial transcriptional regulators of the SorC/DeoR family.
Acta Crystallogr D Struct Biol, 77, 2021
7OZ6
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Crystal structure of Rhizobium etli inducible L-asparaginase ReAV (monoclinic form MC)
分子名称: DI(HYDROXYETHYL)ETHER, L-asparaginase, ZINC ION
著者Gilski, M, Loch, J.I, Imiolczyk, B, Jaskolski, M.
登録日2021-06-25
公開日2021-11-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.757 Å)
主引用文献Crystal structures of the elusive Rhizobium etli L-asparaginase reveal a peculiar active site.
Nat Commun, 12, 2021
7OZ8
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Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT1918_S1_46)
分子名称: 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose, ACETATE ION, Choline-sulfatase
著者Cartmell, A.
登録日2021-06-27
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.
Nat.Chem.Biol., 18, 2022
7OZ9
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Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3057-S1_16)
分子名称: 2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose, 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
著者Cartmell, A.
登録日2021-06-27
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.
Nat.Chem.Biol., 18, 2022
7OZA
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Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3796_S1_16)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
著者Cartmell, A.
登録日2021-06-27
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.
Nat.Chem.Biol., 18, 2022
7OZB
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FGFR1 kinase domain (residues 458-765) with mutations C488A, C584S in complex with 38.
分子名称: 1,2-ETHANEDIOL, 4-[3-(4-piperazin-4-ium-1-ylphenyl)-1H-indazol-6-yl]phenol, Fibroblast growth factor receptor 1, ...
著者Trinh, C.H, Turner, L.D, Fishwick, C.W.G.
登録日2021-06-27
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献From Fragment to Lead: De Novo Design and Development toward a Selective FGFR2 Inhibitor.
J.Med.Chem., 65, 2022
7OZC
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Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3109_S1_15)
分子名称: 6-O-sulfo-beta-D-galactopyranose, Arylsulfatase A, CALCIUM ION
著者Cartmell, A.
登録日2021-06-27
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.
Nat.Chem.Biol., 18, 2022
7OZD
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FGFR1 kinase domain (residues 458-765) with mutations C488A, C584S in complex with 34.
分子名称: 1,2-ETHANEDIOL, Fibroblast growth factor receptor 1, N-[6-(4-hydroxyphenyl)-1H-indazol-3-yl]benzamide, ...
著者Trinh, C.H, Turner, L.D, Fishwick, C.W.G.
登録日2021-06-27
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献From Fragment to Lead: De Novo Design and Development toward a Selective FGFR2 Inhibitor.
J.Med.Chem., 65, 2022
7OZE
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Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT1624-S1_15)
分子名称: 6-O-sulfo-beta-D-galactopyranose, CALCIUM ION, Putative secreted sulfatase
著者Cartmell, A.
登録日2021-06-27
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.
Nat.Chem.Biol., 18, 2022

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件を2024-07-31に公開中

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