DNA replication-dependent chromatin disassembly / regulation of DNA biosynthetic process / negative regulation of growth / regulation of developmental process / regulation of hemopoiesis / MOZ/MORF histone acetyltransferase complex / protein acetylation / regulation of DNA replication / histone acetyltransferase complex / negative regulation of fibroblast proliferation ...DNA replication-dependent chromatin disassembly / regulation of DNA biosynthetic process / negative regulation of growth / regulation of developmental process / regulation of hemopoiesis / MOZ/MORF histone acetyltransferase complex / protein acetylation / regulation of DNA replication / histone acetyltransferase complex / negative regulation of fibroblast proliferation / Regulation of TP53 Activity through Acetylation / methylated histone binding / positive regulation of apoptotic signaling pathway / regulation of cell growth / apoptotic signaling pathway / HATs acetylate histones / fibroblast proliferation / regulation of cell cycle / positive regulation of apoptotic process / negative regulation of cell population proliferation / chromatin binding / regulation of DNA-templated transcription / nucleoplasm / nucleus / metal ion binding Similarity search - Function
Helix Hairpins - #1740 / Inhibitor of growth protein, N-terminal histone-binding / Inhibitor of growth proteins N-terminal histone-binding / Inhibitor of growth proteins N-terminal histone-binding / ING family / Helix Hairpins / Zinc finger, PHD-type, conserved site / Zinc finger PHD-type signature. / Zinc finger PHD-type profile. / Helix non-globular ...Helix Hairpins - #1740 / Inhibitor of growth protein, N-terminal histone-binding / Inhibitor of growth proteins N-terminal histone-binding / Inhibitor of growth proteins N-terminal histone-binding / ING family / Helix Hairpins / Zinc finger, PHD-type, conserved site / Zinc finger PHD-type signature. / Zinc finger PHD-type profile. / Helix non-globular / Zinc finger, PHD-finger / Zinc finger, PHD-type / PHD zinc finger / Special / Zinc finger, FYVE/PHD-type / Zinc finger, RING/FYVE/PHD-type Similarity search - Domain/homology
Resolution: 3.2→44.7 Å / Cor.coef. Fo:Fc: 0.935 / Cor.coef. Fo:Fc free: 0.907 / Rfactor Rfree error: 0 / Cross valid method: THROUGHOUT / σ(F): 0 / SU R Blow DPI: 0.775 / SU Rfree Blow DPI: 0.358 / Details: TLS refinement with one set of TLS per chain
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.248
433
4.77 %
RANDOM
Rwork
0.211
-
-
-
obs
0.213
9076
99.9 %
-
Displacement parameters
Biso mean: 105.53 Å2
Baniso -1
Baniso -2
Baniso -3
1-
3.2505 Å2
0 Å2
0 Å2
2-
-
3.2505 Å2
0 Å2
3-
-
-
-6.501 Å2
Refine analyze
Luzzati coordinate error obs: 0.41 Å
Refinement step
Cycle: 1 / Resolution: 3.2→44.7 Å
Protein
Nucleic acid
Ligand
Solvent
Total
Num. atoms
1758
0
44
13
1815
Refine LS restraints
Refine-ID
Type
Dev ideal
Number
Restraint function
Weight
X-RAY DIFFRACTION
t_bond_d
0.009
3647
HARMONIC
2
X-RAY DIFFRACTION
t_angle_deg
0.99
6575
HARMONIC
2
X-RAY DIFFRACTION
t_dihedral_angle_d
865
SINUSOIDAL
2
X-RAY DIFFRACTION
t_incorr_chiral_ct
X-RAY DIFFRACTION
t_pseud_angle
X-RAY DIFFRACTION
t_trig_c_planes
65
HARMONIC
2
X-RAY DIFFRACTION
t_gen_planes
507
HARMONIC
5
X-RAY DIFFRACTION
t_it
3647
HARMONIC
20
X-RAY DIFFRACTION
t_nbd
2
SEMIHARMONIC
5
X-RAY DIFFRACTION
t_omega_torsion
2.55
X-RAY DIFFRACTION
t_other_torsion
17
X-RAY DIFFRACTION
t_improper_torsion
X-RAY DIFFRACTION
t_chiral_improper_torsion
238
SEMIHARMONIC
5
X-RAY DIFFRACTION
t_sum_occupancies
X-RAY DIFFRACTION
t_utility_distance
X-RAY DIFFRACTION
t_utility_angle
X-RAY DIFFRACTION
t_utility_torsion
X-RAY DIFFRACTION
t_ideal_dist_contact
3998
SEMIHARMONIC
4
LS refinement shell
Resolution: 3.2→3.58 Å / Rfactor Rfree error: 0 / Total num. of bins used: 5
Rfactor
Num. reflection
% reflection
Rfree
0.281
123
4.9 %
Rwork
0.234
2389
-
all
0.236
2512
-
obs
-
-
99.8 %
Refinement TLS params.
Method: refined / Refine-ID: X-RAY DIFFRACTION
ID
L11 (°2)
L12 (°2)
L13 (°2)
L22 (°2)
L23 (°2)
L33 (°2)
S11 (Å °)
S12 (Å °)
S13 (Å °)
S21 (Å °)
S22 (Å °)
S23 (Å °)
S31 (Å °)
S32 (Å °)
S33 (Å °)
T11 (Å2)
T12 (Å2)
T13 (Å2)
T22 (Å2)
T23 (Å2)
T33 (Å2)
Origin x (Å)
Origin y (Å)
Origin z (Å)
1
3.2946
4.8086
3.0917
8.6673
5.8193
4.947
0.0222
-0.1591
0.047
0.8211
-0.2218
0.1574
0.9755
0.1805
0.1996
0.0564
0.0118
0.0834
-0.1178
-0.0443
-0.2778
-57.2935
26.4185
-29.7313
2
2.3258
0.4961
-1.9227
2.2409
-0.6233
7.4564
-0.268
-0.2329
-0.2818
0.0001
0.1311
0.1443
0.8531
0.4949
0.137
-0.307
-0.0893
-0.0635
-0.2565
0.0932
-0.2391
-42.7758
41.0348
-8.2089
Refinement TLS group
ID
Refine-ID
Refine TLS-ID
Selection details
1
X-RAY DIFFRACTION
1
{ A|* }
2
X-RAY DIFFRACTION
2
{ B|* }
+
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