+Open data
-Basic information
Entry | Database: PDB / ID: 1coo | ||||||
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Title | THE COOH-TERMINAL DOMAIN OF RNA POLYMERASE ALPHA SUBUNIT | ||||||
Components | RNA POLYMERASE ALPHA SUBUNIT | ||||||
Keywords | NUCLEOTIDYL TRANSFERASE / TRANSCRIPTION REGULATION | ||||||
Function / homology | Function and homology information submerged biofilm formation / cellular response to cell envelope stress / cytosolic DNA-directed RNA polymerase complex / regulation of DNA-templated transcription initiation / bacterial-type flagellum assembly / bacterial-type flagellum-dependent cell motility / nitrate assimilation / transcription elongation factor complex / regulation of DNA-templated transcription elongation / transcription antitermination ...submerged biofilm formation / cellular response to cell envelope stress / cytosolic DNA-directed RNA polymerase complex / regulation of DNA-templated transcription initiation / bacterial-type flagellum assembly / bacterial-type flagellum-dependent cell motility / nitrate assimilation / transcription elongation factor complex / regulation of DNA-templated transcription elongation / transcription antitermination / DNA-templated transcription initiation / cell motility / DNA-directed 5'-3' RNA polymerase activity / DNA-directed RNA polymerase / response to heat / intracellular iron ion homeostasis / protein dimerization activity / DNA binding / membrane / cytoplasm / cytosol Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Jeon, Y.H. / Negishi, T. / Shirakawa, M. / Yamazaki, T. / Fujita, N. / Ishihama, A. / Kyogoku, Y. | ||||||
Citation | Journal: Science / Year: 1995 Title: Solution structure of the activator contact domain of the RNA polymerase alpha subunit. Authors: Jeon, Y.H. / Negishi, T. / Shirakawa, M. / Yamazaki, T. / Fujita, N. / Ishihama, A. / Kyogoku, Y. #1: Journal: J.Mol.Biol. / Year: 1995 Title: Structural Map of the Alpha Subunit of Escherichia Coli RNA Polymerase; Structural Domains Identified by Proteolytic Cleavage Authors: Negishi, T. / Fujita, N. / Ishihama, A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1coo.cif.gz | 38.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1coo.ent.gz | 26.6 KB | Display | PDB format |
PDBx/mmJSON format | 1coo.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1coo_validation.pdf.gz | 334.7 KB | Display | wwPDB validaton report |
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Full document | 1coo_full_validation.pdf.gz | 342.7 KB | Display | |
Data in XML | 1coo_validation.xml.gz | 4 KB | Display | |
Data in CIF | 1coo_validation.cif.gz | 5 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/co/1coo ftp://data.pdbj.org/pub/pdb/validation_reports/co/1coo | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Atom site foot note | 1: CIS PROLINE - PRO 322 | |||||||||
NMR ensembles |
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-Components
#1: Protein | Mass: 11094.724 Da / Num. of mol.: 1 / Fragment: COOH-TERMINAL DOMAIN Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Strain: K12 / Cell line: NH315 / Plasmid: PET-3A / Production host: Escherichia coli (E. coli) / References: UniProt: P0A7Z4 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other |
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-Processing
Software |
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NMR software | Name: X-PLOR / Version: 3.1 / Developer: BRUNGER / Classification: refinement | ||||||||||||
NMR ensemble | Conformers submitted total number: 1 |