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Open data
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Basic information
| Entry | Database: PDB / ID: 6y67 | ||||||
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| Title | Structure of apo Finch Polyomavirus VP1 | ||||||
Components | Capsid protein VP1 | ||||||
Keywords | VIRAL PROTEIN / Major Capsid Protein / Polyomavirus | ||||||
| Function / homology | Function and homology informationT=7 icosahedral viral capsid / endocytosis involved in viral entry into host cell / virion attachment to host cell / host cell nucleus / structural molecule activity Similarity search - Function | ||||||
| Biological species | Finch polyomavirus | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.618 Å | ||||||
Authors | Stroh, L.J. / Rustmeier, N.H. / Stehle, T. | ||||||
| Funding support | Germany, 1items
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Citation | Journal: Mbio / Year: 2020Title: Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family. Authors: Stroh, L.J. / Rustmeier, N.H. / Blaum, B.S. / Botsch, J. / Rossler, P. / Wedekink, F. / Lipkin, W.I. / Mishra, N. / Stehle, T. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6y67.cif.gz | 1.4 MB | Display | PDBx/mmCIF format |
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| PDB format | pdb6y67.ent.gz | Display | PDB format | |
| PDBx/mmJSON format | 6y67.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 6y67_validation.pdf.gz | 660.2 KB | Display | wwPDB validaton report |
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| Full document | 6y67_full_validation.pdf.gz | 678.5 KB | Display | |
| Data in XML | 6y67_validation.xml.gz | 246.9 KB | Display | |
| Data in CIF | 6y67_validation.cif.gz | 326.5 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/y6/6y67 ftp://data.pdbj.org/pub/pdb/validation_reports/y6/6y67 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 6y5xC ![]() 6y5yC ![]() 6y5zC ![]() 6y60C ![]() 6y61C ![]() 6y63C ![]() 6y64C ![]() 6y65C ![]() 6y66C ![]() 6y6aC ![]() 6y9iC ![]() 4fmgS S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
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About Yorodumi




Finch polyomavirus
X-RAY DIFFRACTION
Germany, 1items
Citation





















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