Entry | Database: PDB / ID: 6k79 |
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Title | Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate. |
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Components | (Glycerol kinase) x 2 |
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Keywords | TRANSFERASE / Glycerol / Kinase / ATP / Archaea |
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Function / homology | Function and homology information
glycerol kinase / glycerol-3-phosphate biosynthetic process / glycerol kinase activity / glycerol metabolic process / glycerol catabolic process / triglyceride metabolic process / phosphorylation / ATP binding / cytosolSimilarity search - Function FGGY family of carbohydrate kinases signature 1. / Glycerol kinase / FGGY family of carbohydrate kinases signature 2. / Carbohydrate kinase, FGGY, conserved site / Carbohydrate kinase, FGGY / Carbohydrate kinase, FGGY, N-terminal / FGGY family of carbohydrate kinases, N-terminal domain / Carbohydrate kinase, FGGY, C-terminal / FGGY family of carbohydrate kinases, C-terminal domain / ATPase, nucleotide binding domain ...FGGY family of carbohydrate kinases signature 1. / Glycerol kinase / FGGY family of carbohydrate kinases signature 2. / Carbohydrate kinase, FGGY, conserved site / Carbohydrate kinase, FGGY / Carbohydrate kinase, FGGY, N-terminal / FGGY family of carbohydrate kinases, N-terminal domain / Carbohydrate kinase, FGGY, C-terminal / FGGY family of carbohydrate kinases, C-terminal domain / ATPase, nucleotide binding domain / ATPase, nucleotide binding domain / Nucleotidyltransferase; domain 5 / 2-Layer Sandwich / Alpha BetaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_archaea.gif) Thermococcus kodakarensis (archaea) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.19 Å |
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Authors | Koga, Y. / Angkawidjaja, C. / Matsumura, H. / Hokao, R. |
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Funding support | Japan, 1items Organization | Grant number | Country |
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Ministry of Education, Culture, Sports, Science and Technology (Japan) | JP22780091 | Japan |
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Citation | Journal: To Be Published Title: Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1 Authors: Hokao, R. / Matsumura, H. / Katsumi, R. / Angkawidjaja, C. / Takano, K. / Kanaya, S. / Koga, Y. |
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History | Deposition | Jun 6, 2019 | Deposition site: PDBJ / Processing site: PDBJ |
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Revision 1.0 | Jun 10, 2020 | Provider: repository / Type: Initial release |
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Revision 1.1 | Mar 27, 2024 | Group: Data collection / Database references / Category: chem_comp_atom / chem_comp_bond / database_2 Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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