- PDB-6hoh: Structure of VPS34 LIR motif (S249E) bound to GABARAP -
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Basic information
Entry
Database: PDB / ID: 6hoh
Title
Structure of VPS34 LIR motif (S249E) bound to GABARAP
Components
Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein
Keywords
SIGNALING PROTEIN / Autophagy / ATG8 / LIR
Function / homology
Function and homology information
positive regulation of protein lipidation / postsynaptic endosome / Toll Like Receptor 9 (TLR9) Cascade / positive regulation of protein K48-linked ubiquitination / Synthesis of PIPs at the late endosome membrane / Synthesis of PIPs at the early endosome membrane / phosphatidylinositol 3-kinase complex, class III, type II / phosphatidylinositol 3-kinase complex, class III, type I / presynaptic endosome / regulation of Rac protein signal transduction ...positive regulation of protein lipidation / postsynaptic endosome / Toll Like Receptor 9 (TLR9) Cascade / positive regulation of protein K48-linked ubiquitination / Synthesis of PIPs at the late endosome membrane / Synthesis of PIPs at the early endosome membrane / phosphatidylinositol 3-kinase complex, class III, type II / phosphatidylinositol 3-kinase complex, class III, type I / presynaptic endosome / regulation of Rac protein signal transduction / phosphatidylinositol 3-kinase complex, class III / host-mediated activation of viral genome replication / phosphatidylinositol kinase activity / Synthesis of PIPs at the Golgi membrane / early endosome to late endosome transport / response to L-leucine / protein targeting to lysosome / positive regulation of lysosome organization / endosome organization / GABA receptor binding / Dengue virus modulates apoptosis / positive regulation of natural killer cell mediated cytotoxicity / phosphatidylethanolamine binding / pexophagy / phagophore assembly site / Translation of Replicase and Assembly of the Replication Transcription Complex / TBC/RABGAPs / cellular response to nitrogen starvation / microtubule associated complex / reticulophagy / phosphatidylinositol 3-kinase / phosphatidylinositol-3-phosphate biosynthetic process / extrinsic apoptotic signaling pathway via death domain receptors / 1-phosphatidylinositol-3-kinase activity / Macroautophagy / phosphatidylinositol phosphate biosynthetic process / regulation of neurotransmitter receptor localization to postsynaptic specialization membrane / phosphatidylinositol-mediated signaling / smooth endoplasmic reticulum / autophagosome membrane / autolysosome / PI3K Cascade / autophagosome maturation / RHO GTPases Activate NADPH Oxidases / autophagosome assembly / protein targeting / axoneme / mitophagy / synaptic vesicle endocytosis / cellular response to glucose starvation / beta-tubulin binding / regulation of macroautophagy / endomembrane system / negative regulation of TORC1 signaling / sperm midpiece / autophagosome / macroautophagy / phosphatidylinositol 3-kinase/protein kinase B signal transduction / regulation of cytokinesis / protein processing / autophagy / Antigen Presentation: Folding, assembly and peptide loading of class I MHC / GABA-ergic synapse / regulation of autophagy / protein sequestering activity / phagocytic vesicle membrane / actin cytoskeleton / positive regulation of proteasomal ubiquitin-dependent protein catabolic process / late endosome / peroxisome / cytoplasmic vesicle / midbody / chemical synaptic transmission / Translation of Replicase and Assembly of the Replication Transcription Complex / microtubule binding / protein kinase activity / lysosome / endosome / Golgi membrane / ubiquitin protein ligase binding / SARS-CoV-2 activates/modulates innate and adaptive immune responses / glutamatergic synapse / membrane / plasma membrane / cytosol Similarity search - Function
B: Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein C: Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein
D: Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein