[English] 日本語
Yorodumi
- PDB-5mmm: Structure of the 70S chloroplast ribosome -

+
Open data


ID or keywords:

Loading...

no data

-
Basic information

Entry
Database: PDB / ID: 5mmm
TitleStructure of the 70S chloroplast ribosome
Descriptorchloroplastic
chloroplastic
chloroplastic
chloroplastic
chloroplastic
and more 46 items
KeywordsRIBOSOME / chloroplast / translation / ribosome / cryo-EM
Specimen sourceSpinacia oleracea / plant / spinach / Spinach / ホウレンソウ
MethodElectron microscopy (3.4 A resolution / Single particle)
AuthorsBieri, P. / Leibundgut, M. / Saurer, M. / Boehringer, D. / Ban, N.
CitationEMBO J., 2017, 36, 475-486

EMBO J., 2017, 36, 475-486 StrPapers
The complete structure of the chloroplast 70S ribosome in complex with translation factor pY.
Philipp Bieri / Marc Leibundgut / Martin Saurer / Daniel Boehringer / Nenad Ban

DateDeposition: Dec 11, 2016 / Release: Jan 11, 2017 / Last modification: Mar 1, 2017

-
Structure visualization

Movie
  • Deposited structure unit
  • Imaged by Jmol
  • Download
3D viewer


View / / Stereo:
Center
Zoom
Scale
Slabnear <=> far

fix: /
Orientation
Orientation Rotation
Misc. /
Show/hide

Downloads & links

-
Assembly

Deposited unit
0: 50S ribosomal protein L31
1: 50S ribosomal protein L32, chloroplastic
2: 50S ribosomal protein L33, chloroplastic
3: 50S ribosomal protein L34, chloroplastic
4: 50S ribosomal protein L35, chloroplastic
5: 50S ribosomal protein L36, chloroplastic
6: plastid ribosomal protein cL37, PSRP5
7: 50S ribosomal protein 6, chloroplastic
A: 23S ribosomal RNA
B: 5S ribosomal RNA
C: 50S ribosomal protein L2, chloroplastic
D: plastid ribosomal protein uL3c
E: plastid ribosomal protein uL4c
F: plastid ribosomal protein uL5c
G: plastid ribosomal protein uL6c
H: plastid ribosomal protein bL9c
I: plastid ribosomal protein uL10c
J: 50S ribosomal protein L11, chloroplastic
K: 50S ribosomal protein L13, chloroplastic
L: 50S ribosomal protein L14, chloroplastic
M: plastid ribosomal protein uL15c
N: 50S ribosomal protein L16, chloroplastic
O: plastid ribosomal protein uL14c
P: plastid ribosomal protein uL18c
Q: 50S ribosomal protein L19, chloroplastic
R: 50S ribosomal protein L20, chloroplastic
S: 50S ribosomal protein L21, chloroplastic
T: 50S ribosomal protein L22, chloroplastic
U: 50S ribosomal protein L23, chloroplastic
V: plastid ribosomal protein uL24c
W: 4.5S ribosomal RNA
X: plastid ribosomal protein bL27c
Y: plastid ribosomal protein bL28c
Z: plastid ribosomal protein uL29c
z: tRNA-Phe
8: plastid ribosomal protein bS1c
a: 16S ribosomal RNA
b: 30S ribosomal protein S2, chloroplastic
c: 30S ribosomal protein S3, chloroplastic
d: 30S ribosomal protein S4, chloroplastic
e: 30S ribosomal protein S5, chloroplastic
f: plastid ribosomal protein bS6c
g: 30S ribosomal protein S7, chloroplastic
h: 30S ribosomal protein S8, chloroplastic
i: plastid ribosomal protein uS9c
j: plastid ribosomal protein uS10c
k: 30S ribosomal protein S11, chloroplastic
l: 30S ribosomal protein S12, chloroplastic
m: plastid ribosomal protein uS13c
n: 30S ribosomal protein S14, chloroplastic
o: 30S ribosomal protein S15, chloroplastic
p: 30S ribosomal protein S16, chloroplastic
q: plastid ribosomal protein uS17c
r: 30S ribosomal protein S18, chloroplastic
s: 30S ribosomal protein S19 alpha, chloroplastic
t: plastid ribosomal protein bS20c
u: plastid ribosomal protein bS21c
v: 30S ribosomal protein 2, chloroplastic
w: 30S ribosomal protein 3, chloroplastic
x: 30S ribosomal protein S31, chloroplastic
y: Ribosome-binding factor PSRP1, chloroplastic
hetero molecules


Theoretical massNumber of molelcules
Total (without water)2,618,916842
Polyers2,599,85161
Non-polymers19,064781
Water0
#1


  • idetical with deposited unit
  • defined by software
TypeNameSymmetry operationNumber
identity operation1_5551
Buried area (A2)306490
ΔGint (kcal/M)-2466
Surface area (A2)837060
MethodPISA

-
Components

+
50S ribosomal protein ... , 17 types, 17 molecules 0123457CJK...

#1: Polypeptide(L)50S ribosomal protein L31 / plastid ribosomal protein bL31c


Mass: 14748.201 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R0R6

Cellular component

Molecular function

#2: Polypeptide(L)50S ribosomal protein L32, chloroplastic / plastid ribosomal protein bL32c


Mass: 6650.969 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P28804

Cellular component

Molecular function

Biological process

#3: Polypeptide(L)50S ribosomal protein L33, chloroplastic / plastid ribosomal protein bL33c


Mass: 7668.121 Da / Num. of mol.: 1 / Details: Zn-binding protein / Source: (natural) Spinacia oleracea / References: UniProt: P28805

Cellular component

Molecular function

Biological process

#4: Polypeptide(L)50S ribosomal protein L34, chloroplastic / plastid ribosomal protein bL34c / CL34


Mass: 16126.633 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82244

Cellular component

Molecular function

Biological process

#5: Polypeptide(L)50S ribosomal protein L35, chloroplastic / plastid ribosomal protein bL35c / CL35


Mass: 17376.322 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P23326

Cellular component

Molecular function

Biological process

#6: Polypeptide(L)50S ribosomal protein L36, chloroplastic / plastid ribosomal protein bL36c


Mass: 4414.462 Da / Num. of mol.: 1 / Details: Zn-binding protein / Source: (natural) Spinacia oleracea / References: UniProt: P12230

Cellular component

Molecular function

Biological process

#8: Polypeptide(L)50S ribosomal protein 6, chloroplastic / plastid ribosomal protein cL38 / PSRP6 / CL25 / Plastid-specific 50S ribosomal protein 6 / PSRP-6


Mass: 12080.688 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82411

Cellular component

Molecular function

Biological process

#11: Polypeptide(L)50S ribosomal protein L2, chloroplastic / plastid ribosomal protein uL2c / Ribosomal protein CS-L4


Mass: 29853.623 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P06509

Cellular component

Molecular function

Biological process

#18: Polypeptide(L)50S ribosomal protein L11, chloroplastic / plastid ribosomal protein uL11c / CL11


Mass: 23689.980 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P31164

Cellular component

Molecular function

Biological process

#19: Polypeptide(L)50S ribosomal protein L13, chloroplastic / plastid ribosomal protein uL13c / CL13


Mass: 28211.629 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P12629

Cellular component

Molecular function

Biological process

#20: Polypeptide(L)50S ribosomal protein L14, chloroplastic / Ribosomal protein CS-L29


Mass: 13484.741 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P09596

Cellular component

Molecular function

Biological process

#22: Polypeptide(L)50S ribosomal protein L16, chloroplastic / plastid ribosomal protein uL15c / Ribosomal protein CS-L24


Mass: 15328.068 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P17353

Cellular component

Molecular function

Biological process

#25: Polypeptide(L)50S ribosomal protein L19, chloroplastic / plastid ribosomal protein bL19c / CL19


Mass: 26121.254 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82413

Cellular component

Molecular function

Biological process

#26: Polypeptide(L)50S ribosomal protein L20, chloroplastic / plastid ribosomal protein bL20c


Mass: 15725.687 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P28803

Cellular component

Molecular function

Biological process

#27: Polypeptide(L)50S ribosomal protein L21, chloroplastic / plastid ribosomal protein bL21c / CL21 / CS-L7


Mass: 28441.730 Da / Num. of mol.: 1
Details: Residues 68-81 were built as poly-alanine and deposited as UNK.
Source: (natural) Spinacia oleracea / References: UniProt: P24613

Cellular component

Molecular function

Biological process

#28: Polypeptide(L)50S ribosomal protein L22, chloroplastic / plastid ribosomal protein uL22c / Ribosomal protein CS-L13


Mass: 23292.676 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P09594

Cellular component

Molecular function

Biological process

#29: Polypeptide(L)50S ribosomal protein L23, chloroplastic / plastid ribosomal protein uL23c / PRPL23


Mass: 21832.164 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: Q9LWB5

Cellular component

Molecular function

Biological process

+
Polypeptide(L) , 23 types, 23 molecules 6DEFGHIMOP...

#7: Polypeptide(L)plastid ribosomal protein cL37, PSRP5


Mass: 15694.817 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9S2M7

Cellular component

Molecular function

#12: Polypeptide(L)plastid ribosomal protein uL3c


Mass: 33034.750 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9QEC7

Cellular component

Molecular function

Biological process

#13: Polypeptide(L)plastid ribosomal protein uL4c


Mass: 32541.645 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RVQ9

Cellular component

Molecular function

Biological process

#14: Polypeptide(L)plastid ribosomal protein uL5c


Mass: 28182.688 Da / Num. of mol.: 1
Details: Residues 39-52 were built as poly-alanine and deposited as UNK.
Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RJX4

Cellular component

Molecular function

Biological process

#15: Polypeptide(L)plastid ribosomal protein uL6c


Mass: 24516.748 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R4N9

Cellular component

Molecular function

Biological process

#16: Polypeptide(L)plastid ribosomal protein bL9c


Mass: 22038.904 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RQ91

Cellular component

Molecular function

Biological process

#17: Polypeptide(L)plastid ribosomal protein uL10c


Mass: 26128.230 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R3N5

Cellular component

Molecular function

#21: Polypeptide(L)plastid ribosomal protein uL15c


Mass: 29081.514 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9QHT0

Cellular component

#23: Polypeptide(L)plastid ribosomal protein uL14c


Mass: 14577.172 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RLJ4

Cellular component

Molecular function

#24: Polypeptide(L)plastid ribosomal protein uL18c


Mass: 18410.205 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9QQ60

Cellular component

Molecular function

#30: Polypeptide(L)plastid ribosomal protein uL24c


Mass: 21417.945 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9QFU9

Cellular component

Molecular function

Biological process

#32: Polypeptide(L)plastid ribosomal protein bL27c


Mass: 21366.447 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R4I2

Cellular component

Molecular function

Biological process

#33: Polypeptide(L)plastid ribosomal protein bL28c


Mass: 16460.488 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RD02

Cellular component

#34: Polypeptide(L)plastid ribosomal protein uL29c


Mass: 19083.385 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R7W8

Cellular component

#36: Polypeptide(L)plastid ribosomal protein bS1c


Mass: 14826.253 Da / Num. of mol.: 1
Details: Residues 1001-1068 (OB-fold) and residues 1101-1143 and 1201-1263 (extensions) were built as poly-alanine and deposited as UNK.
Source: (natural) Spinacia oleracea
#42: Polypeptide(L)plastid ribosomal protein bS6c


Mass: 23510.664 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R0H2

Cellular component

Molecular function

Biological process

#45: Polypeptide(L)plastid ribosomal protein uS9c


Mass: 22415.057 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RY17

Cellular component

Molecular function

Biological process

#46: Polypeptide(L)plastid ribosomal protein uS10c


Mass: 21440.539 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RWE7

Cellular component

#49: Polypeptide(L)plastid ribosomal protein uS13c


Mass: 19310.641 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9R024

Cellular component

Molecular function

Biological process

#53: Polypeptide(L)plastid ribosomal protein uS17c


Mass: 18151.936 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RRR0

Cellular component

Molecular function

Biological process

#56: Polypeptide(L)plastid ribosomal protein bS20c


Mass: 20147.291 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea
#57: Polypeptide(L)plastid ribosomal protein bS21c


Mass: 20616.150 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: A0A0K9RHF9

Cellular component

Molecular function

Biological process

#61: Polypeptide(L)Ribosome-binding factor PSRP1, chloroplastic / plastid pY / 30S ribosomal protein 1 / CS-S5 / CS5 / Plastid-specific 30S ribosomal protein 1 / PSrp-1 / Ribosomal protein 1 / S22


Mass: 33799.266 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P19954

Cellular component

Molecular function

Biological process

-
RNA chain , 5 types, 5 molecules ABWza

#9: RNA chain23S ribosomal RNA / plastid 23S rRNA


Mass: 911344.250 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: GenBank: 7636084
#10: RNA chain5S ribosomal RNA / plastid 5S rRNA


Mass: 39014.184 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea
#31: RNA chain4.5S ribosomal RNA / plastid 4.5S rRNA


Mass: 34334.488 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: GenBank: 12299
#35: RNA chaintRNA-Phe


Mass: 24485.539 Da / Num. of mol.: 1
Details: An idealized full-length E-site E.coli tRNA-Phe (76 residues) from PDB 2J00 was fitted into the density and adjusted prior to minimization.
Source: (natural) Spinacia oleracea
#37: RNA chain16S ribosomal RNA / plastid 16S rRNA


Mass: 483466.500 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: GenBank: 7636084

+
30S ribosomal protein ... , 16 types, 16 molecules bcdeghklno...

#38: Polypeptide(L)30S ribosomal protein S2, chloroplastic / plastid ribosomal protein uS2c


Mass: 26736.141 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P08242

Cellular component

Molecular function

Biological process

#39: Polypeptide(L)30S ribosomal protein S3, chloroplastic / plastid ribosomal protein uS3c


Mass: 24965.156 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P09595

Cellular component

Molecular function

Biological process

#40: Polypeptide(L)30S ribosomal protein S4, chloroplastic / plastid ribosomal protein uS4c


Mass: 23454.531 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P13788

Cellular component

Molecular function

Biological process

#41: Polypeptide(L)30S ribosomal protein S5, chloroplastic / plastid ribosomal protein uS5c


Mass: 33626.363 Da / Num. of mol.: 1
Details: Residues 122-150 were built as poly-alanine and deposited as UNK.
Source: (natural) Spinacia oleracea / References: UniProt: Q9ST69

Cellular component

Molecular function

Biological process

#43: Polypeptide(L)30S ribosomal protein S7, chloroplastic / plastid ribosomal protein uS7c


Mass: 17378.309 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82129

Cellular component

Molecular function

Biological process

#44: Polypeptide(L)30S ribosomal protein S8, chloroplastic / plastid ribosomal protein uS8c


Mass: 15527.256 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P09597

Cellular component

Molecular function

Biological process

#47: Polypeptide(L)30S ribosomal protein S11, chloroplastic / plastid ribosomal protein uS11c


Mass: 14927.551 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P06506

Cellular component

Molecular function

Biological process

#48: Polypeptide(L)30S ribosomal protein S12, chloroplastic / plastid ribosomal protein uS12c


Mass: 13794.261 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P62128

Cellular component

Molecular function

Biological process

#50: Polypeptide(L)30S ribosomal protein S14, chloroplastic / plastid ribosomal protein uS14c


Mass: 11809.832 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P06507

Cellular component

Molecular function

Biological process

#51: Polypeptide(L)30S ribosomal protein S15, chloroplastic / plastid ribosomal protein uS15c


Mass: 10778.763 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: Q9M3I4

Cellular component

Molecular function

Biological process

#52: Polypeptide(L)30S ribosomal protein S16, chloroplastic / plastid ribosomal protein bS16c


Mass: 10454.237 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P28807

Cellular component

Molecular function

Biological process

#54: Polypeptide(L)30S ribosomal protein S18, chloroplastic / plastid ribosomal protein bS18c


Mass: 12079.137 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: Q9M3K7

Cellular component

Molecular function

Biological process

#55: Polypeptide(L)30S ribosomal protein S19 alpha, chloroplastic / plastid ribosomal protein uS19c / CS-S23


Mass: 10632.500 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P06508

Cellular component

Molecular function

Biological process

#58: Polypeptide(L)30S ribosomal protein 2, chloroplastic / plastid ribosomal protein cS22 / Plastid-specific 30S ribosomal protein 2 / PSRP-2


Mass: 28327.863 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82277

Cellular component

Molecular function

#59: Polypeptide(L)30S ribosomal protein 3, chloroplastic / Pplastid ribosomal protein cS23 / plastid-specific 30S ribosomal protein 3 / PSRP-3


Mass: 20312.750 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P82412

Cellular component

Molecular function

Biological process

#60: Polypeptide(L)30S ribosomal protein S31, chloroplastic / plastid ribosomal protein bTHXc / Plastid-specific 30S ribosomal protein 4 / PSRP-4


Mass: 10602.076 Da / Num. of mol.: 1 / Source: (natural) Spinacia oleracea / References: UniProt: P47910

Cellular component

Molecular function

-
Non-polymers , 2 types, 781 molecules

#62: ChemicalChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 2 / Formula: Zn
#63: Chemical...
ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 779 / Formula: Mg

+
Experimental details

-
Experiment

ExperimentMethod: ELECTRON MICROSCOPY
EM experimentReconstruction method: SINGLE PARTICLE

-
Sample preparation

ComponentName: Chloroplast 70S ribosome / Type: RIBOSOME
Specimen supportGrid material: COPPER / Grid type: Quantifoil R2/2
VitrificationInstrument: FEI VITROBOT MARK I / Cryogen name: ETHANE-PROPANE / Humidity: 100

-
Electron microscopy imaging

MicroscopyMicroscope model: FEI TITAN KRIOS
Electron gunElectron source: FIELD EMISSION GUN / Accelerating voltage: 300 kV / Illumination mode: FLOOD BEAM
Electron lensMode: BRIGHT FIELD / Nominal magnification: 59000 X / Nominal defocus max: 3500 nm / Nominal defocus min: 800 nm / Cs: 2.7 mm
Specimen holderSpecimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER

-
Processing

3D reconstructionResolution: 3.4 A / Resolution method: FSC 0.143 CUT-OFF / Number of particles: 140583
Atomic model buildingOverall b value: 90.8 / Ref protocol: OTHER / Ref space: RECIPROCAL

+
About Yorodumi

-
News

-
Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

-
Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

+
Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

Read more

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • All the functionalities will be ported from the levgacy version.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.

Related info.: Yorodumi (legacy version) / EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Yorodumi Papers / Jmol/JSmol / Changes in new EM Navigator and Yorodumi

Read more