+Open data
-Basic information
Entry | Database: PDB / ID: 1x3q | ||||||
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Title | 3D Solution Structure of the Chromo-2 Domain of cpSRP43 | ||||||
Components | cpSRP43 | ||||||
Keywords | UNKNOWN FUNCTION / Chromo-2 domain / cpSRP43 / LHCP / thylakoid / protein translocation | ||||||
Function / homology | Function and homology information protein import into chloroplast thylakoid membrane / protein heterotrimerization / response to high light intensity / signal recognition particle, endoplasmic reticulum targeting / chloroplast envelope / chloroplast stroma / chloroplast thylakoid membrane / chloroplast / disordered domain specific binding / protein-macromolecule adaptor activity ...protein import into chloroplast thylakoid membrane / protein heterotrimerization / response to high light intensity / signal recognition particle, endoplasmic reticulum targeting / chloroplast envelope / chloroplast stroma / chloroplast thylakoid membrane / chloroplast / disordered domain specific binding / protein-macromolecule adaptor activity / protein domain specific binding / protein-containing complex / identical protein binding / metal ion binding / cytosol Similarity search - Function | ||||||
Biological species | Arabidopsis thaliana (thale cress) | ||||||
Method | SOLUTION NMR / simulated annealing, torsion angle dynamics | ||||||
Model type details | minimized average | ||||||
Authors | Sivaraja, V. / Kumar, T.K.S. / Henry, R. / Yu, C. | ||||||
Citation | Journal: To be Published Title: 3D Solution Structure of the Chromo-2 domain of cpSRP43 Authors: Sivaraja, V. / Kumar, T.K.S. / Henry, R. / Yu, C. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1x3q.cif.gz | 386.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1x3q.ent.gz | 337.4 KB | Display | PDB format |
PDBx/mmJSON format | 1x3q.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/x3/1x3q ftp://data.pdbj.org/pub/pdb/validation_reports/x3/1x3q | HTTPS FTP |
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-Related structure data
Related structure data | |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 6548.151 Da / Num. of mol.: 1 / Fragment: Chromo-2 Domain Source method: isolated from a genetically manipulated source Source: (gene. exp.) Arabidopsis thaliana (thale cress) / Tissue: chloroplast / Production host: Escherichia coli (E. coli) / References: UniProt: O22265 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||
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NMR experiment |
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NMR details | Text: This structure was determined using standard 2D and 3D NMR experiments |
-Sample preparation
Details | Contents: 100mM phosphate buffer, 100mM NaCl; 90% H20, 10% D20 Solvent system: 90% H20, 10% D20 |
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Sample conditions | pH: 6.8 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker DMX / Manufacturer: Bruker / Model: DMX / Field strength: 700 MHz |
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-Processing
NMR software |
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Refinement | Method: simulated annealing, torsion angle dynamics / Software ordinal: 1 | ||||||||||||||||
NMR representative | Selection criteria: minimized average structure | ||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |