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Yorodumi- PDB-1hx2: SOLUTION STRUCTURE OF BSTI, A TRYPSIN INHIBITOR FROM BOMBINA BOMBINA. -
+Open data
-Basic information
Entry | Database: PDB / ID: 1hx2 | ||||||
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Title | SOLUTION STRUCTURE OF BSTI, A TRYPSIN INHIBITOR FROM BOMBINA BOMBINA. | ||||||
Components | BSTI | ||||||
Keywords | HYDROLASE INHIBITOR / beta-sheet disulfide-rich | ||||||
Function / homology | Trypsin Inhibitor-like, cysteine rich domain / Serine protease inhibitor-like superfamily / Trypsin Inhibitor like cysteine rich domain / Laminin / Laminin / Ribbon / Mainly Beta / BSTI-precursor Function and homology information | ||||||
Biological species | Bombina bombina (fire-bellied toad) | ||||||
Method | SOLUTION NMR / torsion angle dynamics | ||||||
Authors | Rosengren, K.J. / Daly, N.L. / Scanlon, M.J. / Craik, D.J. | ||||||
Citation | Journal: Biochemistry / Year: 2001 Title: Solution structure of BSTI: a new trypsin inhibitor from skin secretions of Bombina bombina. Authors: Rosengren, K.J. / Daly, N.L. / Scanlon, M.J. / Craik, D.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1hx2.cif.gz | 342.9 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1hx2.ent.gz | 301.8 KB | Display | PDB format |
PDBx/mmJSON format | 1hx2.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/hx/1hx2 ftp://data.pdbj.org/pub/pdb/validation_reports/hx/1hx2 | HTTPS FTP |
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-Related structure data
Related structure data | |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 6510.591 Da / Num. of mol.: 1 / Source method: isolated from a natural source Details: FROGS WERE STIMULATED WITH MILD ELECTRIC SHOCKS. SKIN SECRETIONS WERE COLLECTED. BSTI WAS ISOLATED FROM THE SKIN SECRETIONS. Source: (natural) Bombina bombina (fire-bellied toad) / References: UniProt: Q90248 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: This structure was determined using standard 2D homonuclear techniques. |
-Sample preparation
Details |
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Sample conditions |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: torsion angle dynamics / Software ordinal: 1 Details: Preliminary structures were generated with a torsion angle dynamics protocol within DYANA. Final structures were generated with TAD in XPLOR. Structures were energy minimised under influence ...Details: Preliminary structures were generated with a torsion angle dynamics protocol within DYANA. Final structures were generated with TAD in XPLOR. Structures were energy minimised under influence of the CHARMM forcefield. | ||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 50 / Conformers submitted total number: 20 |