Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	Fragment-based drug design of a bacterial kinase inhibitor capable of increasing the antibiotic sensitivity of clinical isolates.
Journal, issue, pages	Commun Chem, Vol. 8, Page 417-417, Year 2025
Publish date	Mar 24, 2025 (structure data deposition date)
Authors	Kowalewski, J. / Deutscher, R. / Richardoz, M. / Tomaszczyk, M. / Gelin, M. / Labesse, G. / Hausch, F. / Wright, G.D. / Dunyach-Remy, C. / Guichou, J.F. / Lionne, C.
External links	Commun Chem / PubMed:41310159
Methods	X-ray diffraction
Resolution	1.78 - 2.65 Å
Structure data	PDB-9qmr: APH(2'')-Id with a fragment Method: X-RAY DIFFRACTION / Resolution: 1.78 Å PDB-9qn6: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.3 Å PDB-9qnn: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.65 Å PDB-9qnq: APH(2'')-Id with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.38 Å PDB-9qns: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2 Å PDB-9qnw: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.3 Å PDB-9qnx: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.11 Å PDB-9qny: APH(2'')-Id with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.41 Å PDB-9qod: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.29 Å PDB-9qoe: APH(2'')-Id with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.3 Å PDB-9qok: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 1.88 Å PDB-9qol: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.13 Å PDB-9qom: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.13 Å PDB-9qos: APH(3')-IIb with an inhibitor Method: X-RAY DIFFRACTION / Resolution: 1.97 Å PDB-9qp9: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.3 Å PDB-9qpb: APH(2'')-IVa with an inhibitor Method: X-RAY DIFFRACTION / Resolution: 1.86 Å PDB-9qpd: APH(2'')-IVa with a fragment Method: X-RAY DIFFRACTION / Resolution: 2.3 Å PDB-9qpl: APH(2'')-IVa with an inhibitor Method: X-RAY DIFFRACTION / Resolution: 2.04 Å
Chemicals	PDB-1i7k: CRYSTAL STRUCTURE OF HUMAN MITOTIC-SPECIFIC UBIQUITIN-CONJUGATING ENZYME, UBCH10 ChemComp-DMS: DIMETHYL SULFOXIDE / DMSO, precipitantYM ChemComp-HOH: WATER PDB-1i7w: BETA-CATENIN/PHOSPHORYLATED E-CADHERIN COMPLEX PDB-1i72: HUMAN S-ADENOSYLMETHIONINE DECARBOXYLASE WITH COVALENTLY BOUND PYRUVOYL GROUP AND COVALENTLY BOUND 5'-DEOXY-5'-[N-METHYL-N-(2-AMINOOXYETHYL) AMINO]ADENOSINE PDB-1i73: COMPLEX OF PRO-LEU-L-TRP PHOSPHONATE WITH THE CATALITIC DOMAIN OF MATRIX METALLO PROTEINASE-8 (MET80 FORM) PDB-1i74: STREPTOCOCCUS MUTANS INORGANIC PYROPHOSPHATASE PDB-1i75: CRYSTAL STRUCTURE OF CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP.#1011 COMPLEXED WITH 1-DEOXYNOJIRIMYCIN PDB-1i79: HUMAN S-ADENOSYLMETHIONINE DECARBOXYLASE WITH COVALENTLY BOUND PYRUVOYL GROUP AND COVALENTLY BOUND 5'-DEOXY-5'-[(3-HYDRAZINOPROPYL)METHYLAMINO]ADENOSINE PDB-1i78: CRYSTAL STRUCTURE OF OUTER MEMBRANE PROTEASE OMPT FROM ESCHERICHIA COLI PDB-1i8b: Chalcone synthase (G256F) PDB-1i77: CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ESSEX 6 PDB-1i8f: THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE ChemComp-PWD: 5-fluoro-1H-pyrrolo[2,3-b]pyridine PDB-1i8e: NMR ENSEMBLE OF ION-SELECTIVE LIGAND A22 FOR PLATELET INTEGRIN ALPHAIIB-BETA3 PDB-1i84: CRYO-EM STRUCTURE OF THE HEAVY MEROMYOSIN SUBFRAGMENT OF CHICKEN GIZZARD SMOOTH MUSCLE MYOSIN WITH REGULATORY LIGHT CHAIN IN THE DEPHOSPHORYLATED STATE. ONLY C ALPHAS PROVIDED FOR REGULATORY LIGHT CHAIN. ONLY BACKBONE ATOMS PROVIDED FOR S2 FRAGMENT. PDB-1i83: BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH N1,N14-BIS((S-METHYL)ISOTHIOUREIDO)TETRADECANE (H4B FREE) ChemComp-GVH: 1H-PYRROLO[2,3-B]PYRIDINE PDB-1i86*: CHALCONE SYNTHASE, G256A MUTANT
Source	enterococcus casseliflavus (bacteria) pseudomonas aeruginosa (bacteria)
Keywords	ANTIBIOTIC / inhibitor / complex / enzyme