[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 51 items for (author: van & vliet & ar)

EMDB-17789:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined with C3 symmetry applied
Method: single particle / : Chiduza GN, Pye VE, Tooze SA, Cherepanov P

EMDB-17790:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined without imposing symmetry
Method: single particle / : Chiduza GN, Pye VE, Tooze SA, Cherepanov P

PDB-8poe:
Structure of tissue-specific lipid scramblase ATG9B homotrimer, refined with C3 symmetry applied
Method: single particle / : Chiduza GN, Pye VE, Tooze SA, Cherepanov P

EMDB-15604:
ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation
Method: single particle / : Chiduza GN, van Vliet AR, De Tito S, Punch EK, Tooze SA

EMDB-15605:
Low resolution 3D reconstruction of ATG2A from cryo-EM
Method: single particle / : Cherepanov P, Chiduza GN, Pye VE, van Vliet AR, Tooze SA

EMDB-12798:
Hexameric coxsackievirus B3 2C protein in complex with S-fluoxetine
Method: single particle / : Hurdiss DL, Forster F

EMDB-7632:
CryoEM structure of human enterovirus D68 full particle (after incubation with heparin-derived hexasaccharide)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7633:
CryoEM structure of human enterovirus D68 full virion
Method: single particle / : Liu Y, Rossmann MG

EMDB-7634:
CryoEM structure of human enterovirus D68 emptied particle
Method: single particle / : Liu Y, Rossmann MG

EMDB-7635:
CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7636:
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7638:
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv1:
CryoEM structure of human enterovirus D68 full particle (after incubation with heparin-derived hexasaccharide)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv2:
CryoEM structure of human enterovirus D68 full virion
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv3:
CryoEM structure of human enterovirus D68 emptied particle
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv4:
CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cv5:
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cvb:
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Method: single particle / : Liu Y, Rossmann MG

EMDB-7567:
CryoEM structure of human enterovirus D68 abortive product 1 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7569:
CryoEM structure of human enterovirus D68 full native virion (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7571:
CryoEM structure of human enterovirus D68 A-particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7572:
CryoEM structure of human enterovirus D68 emptied particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7583:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7589:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7592:
CryoEM structure of human enterovirus D68 abortive product 2 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7593:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7598:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

EMDB-7599:
CryoEM structure of human enterovirus D68 full native virion
Method: single particle / : Liu Y, Rossmann MG

EMDB-7600:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9053:
CryoEM structure of human enterovirus D68 full native virion (pH 6.5, 4 degrees Celsius, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9054:
CryoEM structure of human enterovirus D68 A-particle (pH 6.5, 4 degrees Celsius, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9055:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 6.5, 4 degrees Celsius, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9056:
CryoEM structure of human enterovirus D68 full native virion (pH 6.5, room temperature, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9057:
CryoEM structure of human enterovirus D68 A-particle (pH 6.5, room temperature, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9058:
CryoEM structure of human enterovirus D68 full native virion (pH 6.0, room temperature, 30 sec)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9059:
CryoEM structure of human enterovirus D68 A-particle (pH 6.0, room temperature, 30 sec)
Method: single particle / : Liu Y, Rossmann MG

EMDB-9060:
CryoEM structure of human enterovirus D68 A-particle (pH 6.0, room temperature, 3 min)
Method: single particle / : Liu Y, Rossmann MG

PDB-6crp:
CryoEM structure of human enterovirus D68 abortive product 1 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6crr:
CryoEM structure of human enterovirus D68 full native virion (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6crs:
CryoEM structure of human enterovirus D68 A-particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cru:
CryoEM structure of human enterovirus D68 emptied particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs3:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs4:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs5:
CryoEM structure of human enterovirus D68 abortive product 2 (pH 7.2 and 4 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6cs6:
CryoEM structure of human enterovirus D68 A-particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

PDB-6csa:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and room temperature)
Method: single particle / : Liu Y, Rossmann MG

PDB-6csg:
CryoEM structure of human enterovirus D68 full native virion
Method: single particle / : Liu Y, Rossmann MG

PDB-6csh:
CryoEM structure of human enterovirus D68 emptied particle (pH 5.5 and 33 degrees Celsius)
Method: single particle / : Liu Y, Rossmann MG

PDB-6mzi:
CryoEM structure of human enterovirus D68 expanded 1 particle (pH 6.5, 4 degrees Celsius, 3 min)
Method: single particle / : Liu Y, Rossmann MG

EMDB-3880:
Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1
Method: single particle / : Hurdiss DL, Ranson NA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more