[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,873 items for (author: zheng & h)

EMDB-65963:
In situ subtomogram average of 80S ribosome (local refined with LSU mask)
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68807:
Cryo-EM structure of human apoferritin at 1.81 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68808:
Cryo-EM structure of human apoferritin at 1.79 Angstrom resolution(using BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68809:
Cryo-EM structure of human apoferritin at 1.64 Angstrom resolution(using CR-BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68810:
Cryo-EM structure of human apoferritin at 1.65 Angstrom resolution(using BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68811:
Cryo-EM structure of human apoferritin at 2.05 Angstrom resolution(using CR-BIS data collection on K3).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68812:
Cryo-EM structure of human apoferritin at 2.05 Angstrom resolution(using BIS data collection on K3).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68813:
Subtomogram average structure of human apoferritin at 2.21 Angstrom resolution(using CR-BIS data collection on K3).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68814:
Subtomogram average structure of human apoferritin at 2.28 Angstrom resolution(using BIS data collection on K3).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68815:
Subtomogram average structure of human apoferritin at 1.98 Angstrom resolution(using CR-BIS data collection on Falcon4i).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68816:
Subtomogram average structure of human apoferritin at 2.01 Angstrom resolution(using BIS data collection on Falcon4i).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68817:
Subtomogram average structure of human apoferritin at 2.24 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68818:
Subtomogram average structure of human apoferritin at 2.34 Angstrom resolution(using BIS data collection on Falcon4).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-63485:
The consensus map of HBx-Smc5/6 ubiquitination complex
Method: single particle / : Tong C, Lili D, Hongshuai L, Jinhong Z, Qian X, Lanfeng W

EMDB-75881:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of PP7 virus-like-particle without VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Siems H, Serwas D, Paraan M, Montabana EA, Yu Y

EMDB-75882:
Evaluating the Volta Phase Plate for Improved Tomogram Alignment in Cryo-Electron Tomography: structure of PP7 virus-like-particle with VPP (full dataset)
Method: subtomogram averaging / : Hutchings J, Ji D, Ali M, Siems H, Serwas D, Paraan M, Montabana EA, Yu Y

EMDB-77042:
Apoferritin with crossed laser phase plate (xLPP), xLPP-on
Method: single particle / : Yu Y, Kopylov M, Cheng A, Montabana E, Olshin P

EMDB-77043:
Apoferritin with crossed laser phase plate (xLPP), xLPP-on, paired dataset
Method: single particle / : Yu Y, Kopylov M, Cheng A, Montabana E, Olshin P

EMDB-77047:
Apoferritin with crossed laser phase plate (xLPP), xLPP-off, paired dataset
Method: single particle / : Yu Y, Kopylov M, Cheng A, Montabana E, Olshin P

EMDB-75431:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75434:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75435:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sd:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sg:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sh:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-65029:
Wild-type VCP in complex with small molecular inhibitor NMS-873
Method: single particle / : Pan M, Zheng Q, Liu L

EMDB-65037:
Recombinantly expressed VCP containing the A232E mutation
Method: single particle / : Pan M, Zheng Q, Liu L

EMDB-65483:
In situ Tspan-7 spiral structure in retraction fiber
Method: helical / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65033:
Recombinantly expressed wild-type VCP
Method: single particle / : Pan M, Zheng Q, Liu L

EMDB-65035:
Recombinantly expressed VCP containing the R155H mutation
Method: single particle / : Pan M, Zheng Q, Liu L

EMDB-71019:
Consensus map of E. coli clamp loader DnaX-complex loading beta-clamp onto 10-nt gapped DNA in state 1 the DNA recognition state
Method: single particle / : Zheng F, Yao YN, Georgescu R, O'Donnell ME, Li H

EMDB-71020:
Focus refined map of E. coli clamp loader sub-complex Psi-Chi
Method: single particle / : Zheng F, Yao YN, Georgescu R, O'Donnell ME, Li H

EMDB-74594:
Cryo-EM structure of NRAS(Q61K)-BRIL fusion in complex with Fab(BAG2) and Monobody(Mb24)
Method: single particle / : Hu Z, Koide S

PDB-9zr7:
Cryo-EM structure of NRAS(Q61K)-BRIL fusion in complex with Fab(BAG2) and Monobody(Mb24)
Method: single particle / : Hu Z, Koide S

EMDB-66046:
ALECT2 type Ia filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66047:
ALECT2 type Ib filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66048:
ALECT2 type IIa filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66049:
ALECT2 type IIb filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66050:
ALECT2 type III filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

PDB-9wl5:
ALECT2 type Ia filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

PDB-9wl6:
ALECT2 type Ib filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

PDB-9wl7:
ALECT2 type IIa filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

PDB-9wl8:
ALECT2 type IIb filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

PDB-9wl9:
ALECT2 type III filament from renal biopsy tissue of an individual with ALECT2 amyloidosis
Method: helical / : Zheng J, Zheng Y, Shi Y

EMDB-66051:
Local refinement region of SARS-CoV-2 spike RBD in complex with antibodies CT1-5.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

PDB-9wla:
Local refinement region of SARS-CoV-2 spike RBD in complex with antibodies CT1-5.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-65841:
cryo-EM structure of RIBEYE SAM thick filament
Method: helical / : Liu Y, Niu F, Wei Z

EMDB-65842:
cryo-EM structure of RIBEYE SAM thin filament
Method: helical / : Liu Y, Niu F, Wei Z

EMDB-65843:
cryo-EM structure of RIBEYE B' filament
Method: helical / : Liu Y, Niu F, Wei Z

EMDB-66052:
Local refinement region of SARS-CoV-2 spike RBD in complex with antibodies S309 and CT1-1.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more