[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,441 items for (author: zhao & p)

EMDB-66823:
Cryo-EM structure of the Bavachalcone bound FFAR4-Giq complex
Method: single particle / : Zhu S, Wang Z

EMDB-66824:
Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)
Method: single particle / : Zhu S, Wang Z

PDB-9xfi:
Cryo-EM structure of the Bavachalcone bound FFAR4-Giq complex
Method: single particle / : Zhu S, Wang Z

PDB-9xfj:
Cryo-EM structure of the Bavachalcone bound GPR120-Giq complex (local refinement)
Method: single particle / : Zhu S, Wang Z

EMDB-69003:
Complex of FMDV O/HN/CHA/93 and porcine-derived neutralizing monoclonal antibody pO18-29
Method: single particle / : Wu S, Lei D

EMDB-69004:
Complex of FMDV O/18074 and porcine-derived neutralizing monoclonal antibody pO18-29
Method: single particle / : Wu S, Lei D

EMDB-80320:
CyroEM structure of the complex between Shiga toxin Stx1a B subunit and neutralising Fab fragment of RDS045
Method: single particle / : Chen SD, Li X

PDB-25rg:
CyroEM structure of the complex between Shiga toxin Stx1a B subunit and neutralising Fab fragment of RDS045
Method: single particle / : Chen SD, Li X

EMDB-55893:
Drebrin actin binding domain 1 conformation A (ABD1a) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-55894:
Drebrin actin binding domain 1 conformation B (ABD1b) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-55895:
Drebrin actin binding domain 2 bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tg8:
Drebrin actin binding domain 1 conformation A (ABD1a) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tg9:
Drebrin actin binding domain 1 conformation B (ABD1b) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tga:
Drebrin actin binding domain 2 bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-66141:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-66142:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

PDB-9wpf:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpg:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

EMDB-75667:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Ke A, Terns M

EMDB-75685:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Chu X, Ke A, Terns M

EMDB-75686:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Chu X, Ke A, Terns M

PDB-11fs:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Ke A, Terns M

PDB-11hc:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Chu X, Ke A, Terns M

PDB-11hd:
Effector complex from type IV-C CRISPR-Cas system
Method: single particle / : Pittman C, Xu C, Catchpole R, Garrett S, Fuchs R, Makarova K, Koonin E, Zhao P, Wells L, Graveley B, Chu X, Ke A, Terns M

EMDB-80337:
CyroEM structure of the complex between Shiga toxin Stx1a B subunit and neutralising Fab fragment of RDS059
Method: single particle / : Chen SD, Li X

PDB-25sb:
CyroEM structure of the complex between Shiga toxin Stx1a B subunit and neutralising Fab fragment of RDS059
Method: single particle / : Chen SD, Li X

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-68781:
In situ cryo sub-tomogram average of axoneme in sperm flagella from Rgs22 knockout mice
Method: subtomogram averaging / : Ye-Jun P

EMDB-66931:
Cryo-EM structure of Hsp90(E47A)-FKBP8 complex
Method: single particle / : Ge M, Li Z, Bai Z, Zhang Y, Zhang Z

PDB-9xj8:
Cryo-EM structure of Hsp90(E47A)-FKBP8 complex
Method: single particle / : Ge M, Li Z, Bai Z, Zhang Y, Zhang Z

EMDB-68387:
Perinereis linea erythrocruorin
Method: single particle / : Deng JX, Jiang YL, Zhou CZ

PDB-22jw:
Perinereis linea erythrocruorin
Method: single particle / : Deng JX, Jiang YL, Zhou CZ

EMDB-66890:
SARS-CoV-2 Omicron BA.4/5 spike RBD in complex with C092 Fab and ACE2
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66891:
SARS-CoV-2 Omicron BA.4/5 spike trimer in complex with C092 Fab and ACE2 (2 RBD up)
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66892:
SARS-CoV-2 Omicron BA.4/5 spike trimer in complex with C092 Fab and ACE2 (3 RBD up)
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66893:
SARS-CoV-2 Omicron BA.4/5 spike RBD in complex with C092 Fab and ACE2
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66894:
SARS-CoV-2 Omicron BA.4/5 spike RBD in complex with C807 Fab and ACE2
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66895:
SARS-CoV-2 Omicron BA.4/5 spike trimer in complex with C807 Fab and ACE2 (3 RBD up)
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66896:
SARS-CoV-2 Omicron BA.4/5 spike RBD in complex with BD56-104 Fab and ACE2
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66897:
SARS-CoV-2 Omicron BA.4/5 spike trimer in complex with BD56-104 Fab and ACE2 (3 RBD up)
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66898:
SARS-CoV-2 Omicron BA.4/5 spike RBD in complex with BD56-597 Fab and ACE2
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66899:
SARS-CoV-2 Omicron BA.4/5 spike trimer in complex with BD56-597 Fab and ACE2 (3 RBD up)
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66900:
Sarbecovirus GX2013 Spike S1 in complex with C092 Fab
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-66901:
SARS-CoV-2 Omicron LP.8.1 spike trimer (S-6P) in complex with 3 ZL58 Fabs and 3 ZL525 Fabs, focused refinement of RBD and Fab region
Method: single particle / : Niu C, Liu B, Gao X, Li Z, He J, Xiong X

EMDB-48304:
Cryo-EM structure of human NBCn2
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

EMDB-48318:
Cryo-EM structure of human NBCn2 bound to Carbonate
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

EMDB-48320:
Cryo-EM structure of human NBCn2 bound to Compound 38J
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

PDB-9mix:
Cryo-EM structure of human NBCn2
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

PDB-9mjo:
Cryo-EM structure of human NBCn2 bound to Carbonate
Method: single particle / : Yang S, Capper MJ, Zilberg G, Warren AL, Wacker D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more