[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 16,561 items for (author: zhang & y)

EMDB-72014:
Latent-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-73804:
Cryo-EM structure of the mitochondrial NCLX in its monomeric state
Method: single particle / : Zhang L, Jiang Y

EMDB-73805:
Cryo-EM structure of the mitochondrial NCLX in its trimeric state
Method: single particle / : Zhang L, Jiang Y

PDB-9z4i:
Cryo-EM structure of the mitochondrial NCLX in its monomeric state
Method: single particle / : Zhang L, Jiang Y

PDB-9z4j:
Cryo-EM structure of the mitochondrial NCLX in its trimeric state
Method: single particle / : Zhang L, Jiang Y

EMDB-63146:
Cryo-EM structure of the DRT2-ncRNA complex
Method: single particle / : Zhang JT, Qing H, Xia YS, Song XY, Jia N

EMDB-63147:
Cryo-EM structure of the dGTP bound DRT2-ncRNA complex
Method: single particle / : Zhang JT, Qing H, Xia YS, Jia N

PDB-9lje:
Cryo-EM structure of the DRT2-ncRNA complex
Method: single particle / : Zhang JT, Qing H, Xia YS, Song XY, Jia N

PDB-9ljf:
Cryo-EM structure of the dGTP bound DRT2-ncRNA complex
Method: single particle / : Zhang JT, Qing H, Xia YS, Jia N

EMDB-80106:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

PDB-25ho:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

EMDB-54704:
Structure of Yeast RNA polymerase II elongation complex apo-state-I
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54705:
CryoEM map of Yeast RNA polymerase II elongation complex apo-state-I-A
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-54706:
CryoEM map of Yeast RNA polymerase II elongation complex apo-state-I-B
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54709:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-A
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-54711:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-C
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9say:
Structure of Yeast RNA polymerase II elongation complex apo-state-I
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9sb1:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-A
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

PDB-9sb3:
Structure of Yeast RNA polymerase II elongation complex with NTP-state-VII-C
Method: single particle / : Yi G, Li Q, Zhang P, Wang D

EMDB-69132:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

PDB-23or:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

EMDB-65582:
Cryo-EM structure of two abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

EMDB-65591:
Cryo-EM structure of four abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

EMDB-65592:
Cryo-EM structure of nucleotide-free LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w2w:
Cryo-EM structure of two abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w35:
Cryo-EM structure of four abaucin-bound LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w36:
Cryo-EM structure of nucleotide-free LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

EMDB-65314:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

EMDB-65343:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-9vt4:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

PDB-9vts:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

EMDB-65254:
AMG986-bound APLNR dimer in active state 2a in complex with Gi-protein
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-65255:
AMG986-bound APLNR dimer in active state 2b in complex with Gi-protein
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9vpm:
AMG986-bound APLNR dimer in active state 2a in complex with Gi-protein
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

PDB-9vpn:
AMG986-bound APLNR dimer in active state 2b in complex with Gi-protein
Method: single particle / : Ji S, Wang W, Yang Y, Shen Q, Zhang Y

EMDB-65484:
Tspan-7 Tetramer Structure in Retraction Fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65485:
Tspan-7 dimer structure in retraction fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65519:
in situ Tspan-7 spiral structure in cellular retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65524:
in situ Tspan7-GFP spiral in retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-58700:
Amyloid beta oligomer Interactions with Extracellular Vesicles by Cryo-ET
Method: electron tomography / : Khursheed A, Viles JH, Zhang H, Shang Q, Tian Y, Szwedziak P, Volkov VA

EMDB-65811:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (TTGA) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

EMDB-65812:
Cryo-EM structure of AtCas9-sgRNA-B-form DNA ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

EMDB-67605:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (CATA PAM) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

EMDB-67606:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (TATA PAM) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

PDB-21dz:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (CATA PAM) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

PDB-21ea:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (TATA PAM) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

PDB-9wac:
Cryo-EM structure of AtCas9-sgRNA-underwound DNA (TTGA) ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

PDB-9wad:
Cryo-EM structure of AtCas9-sgRNA-B-form DNA ternary complex
Method: single particle / : Meng B, Duan M, Wu LJ, Liu ZJ, Zhang Y

EMDB-54677:
CryoEM map of Yeast RNA polymerase II elongation complex with ATP-3D class A (frame1)
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more