[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 79 items for (author: zhang & fm)

EMDB-56238:
In situ cryo-ET subtomogram averaged map of Flotillin complex
Method: subtomogram averaging / : Li D, Lizarrondo J, Wilfling F

EMDB-56295:
In situ cryo-ET tomogram of a lysosomal structure in untreated HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56296:
In situ cryo-ET tomogram of lysosome damaged by LLOMe (0.5mM, 60min) in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56297:
In situ cryo-ET of lysosome damaged by LLOMe (0.5mM, 60min) encapsulated in an autophagosome in HeLa TMEM192-3xHA cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56298:
In situ cryo-ET tomogram of lysosomes in BAPTA AM pre-treated (50uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56300:
In situ cryo-ET tomogram of lysosomes in LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56327:
In situ cryo-ET tomogram of lysosomal structure in untreated rat hippocampal neurons
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-56329:
In situ cryo-ET tomogram of lysosomes in E64d pre-treated (20uM, 30min) and LLOMe (0.5mM, 60min) treated TMEM192-3xHA HeLa cell.
Method: electron tomography / : Li D, Wilfling F

EMDB-56330:
In situ cryo-ET tomogram of lysosomal structure in LLOMe-treated (0.5mM, 1h) rat hippocampal neuron.
Method: electron tomography / : Li D, Schwarz A, Wilfling F

EMDB-47879:
Human adenosine A3 receptor Gi1 complex bound to adenosine
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47880:
Human adenosine A3 receptor Gi complex (mini-Gsi chimera) bound to Piclidenoson (CF101, IB-MECA)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47994:
Focused refinement map of the human A3 adenosine receptor bound to adenosine (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-47998:
Focused refinement map of the human A3 adenosine receptor bound to Piclidenoson (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48063:
Consensus map for A3AR-LUF7602 complex.
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48064:
Focused refinement map of the structure of a human adenosine A3 receptor complex bound to the covalent antagonist LUF7602 (receptor only)
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-48065:
Structure of a human adenosine A3 receptor complex bound to the covalent antagonist LUF7602
Method: single particle / : Zhang L, Mobbs JI, Glukhova A, Thal DM

EMDB-44790:
Structure of the IFN-lambda4/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta
Method: single particle / : Zhang B, Grubbe WS, Mendoza JL, Zhao M

EMDB-44791:
Structure of the IFN-lambda3/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta
Method: single particle / : Zhang B, Grubbe WS, Mendoza JL, Zhao M

PDB-9bpu:
Structure of the IFN-lambda4/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta
Method: single particle / : Zhang B, Grubbe WS, Mendoza JL, Zhao M

PDB-9bpv:
Structure of the IFN-lambda3/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta
Method: single particle / : Zhang B, Grubbe WS, Mendoza JL, Zhao M

EMDB-41133:
Autographa californica multiple nucleopolyhedrovirus VP39
Method: helical / : Benning FMC, Chao LH

EMDB-17010:
CryoEM Structure INO80core Hexasome complex Rvb core refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8ooc:
CryoEM Structure INO80core Hexasome complex Rvb core refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17006:
CryoEM Structure INO80core Hexasome complex composite map state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17007:
CryoEM Structure INO80core Hexasome complex ATPase-DNA refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17008:
CryoEM Structure INO80core Hexasome complex Hexasome refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17012:
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17017:
CryoEM Structure INO80core Hexasome complex Arp5 grappler refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17025:
INO80 core bound to hexasome composite map of state 2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17026:
CryoEM Structure INO80core Hexasome complex Rvb core refinement state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17027:
CryoEM Structure INO80core Hexasome complex ATPase-hexasome refinement state 2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17028:
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17676:
INO80 core bound to hexasome focused refinement of Arp5 grappler
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oo7:
CryoEM Structure INO80core Hexasome complex composite model state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oo9:
CryoEM Structure INO80core Hexasome complex ATPase-DNA refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8ooa:
CryoEM Structure INO80core Hexasome complex Hexasome refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oof:
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8ook:
CryoEM Structure INO80core Hexasome complex Arp5 grappler refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oop:
CryoEM Structure INO80core Hexasome complex composite model state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oor:
CryoEM Structure INO80core Hexasome complex Rvb core refinement state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oos:
CryoEM Structure INO80core Hexasome complex ATPase-hexasome refinement state 2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

PDB-8oot:
CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17019:
CryoEM Structure INO80core Hexasome complex overall refinement state1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17023:
CryoEM Structure INO80core Hexasome complex ATPase-hexasome refinement state 1
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17029:
CryoEM Structure INO80core Hexasome complex overall refinement state2
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-17032:
CryoEM Structure INO80 hexasome complex Arp8 module bound to DNA
Method: single particle / : Zhang M, Jungblut A, Hoffmann T, Eustermann S

EMDB-27939:
Structure of the human ACE2 receptor in complex with antibody Fab fragment, 05B04
Method: single particle / : Barnes CO

EMDB-27640:
Org 2274179-0-bound Thyrotropin Receptor
Method: single particle / : Faust B, Cheng Y, Manglik A

EMDB-27647:
Human thyrotropin analog TR1402 bound to human Thyrotropin receptor (extracellular domain map only)
Method: single particle / : Faust B, Cheng Y, Manglik A

EMDB-27648:
Human thyrotropin analog TR1402 bound to human Thyrotropin receptor (transmembrane domain and G protein map only)
Method: single particle / : Faust B, Cheng Y, Manglik A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more