[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 15,858 items for (author: yu & x)

EMDB-72906:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

PDB-9yfu:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-64335:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64363:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64365:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64367:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

PDB-9unw:
mouse PDCD5-TRiC complex
Method: single particle / : Song QQ, Cong Y

EMDB-64575:
CryoEM Structure of LmuAB-DNA complex
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y, Chang C

EMDB-64576:
CryoEM Structure of LmuAB Apo State
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y, Chang C

EMDB-64583:
type II Lamassu, LmuACB with DNA
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

EMDB-64584:
type II Lamassu, LmuA tetramer
Method: single particle / : Zhao X, Li S, Feng Y, Zhang K, Hu R, Liu L

EMDB-64585:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K, Liu L

EMDB-64586:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K, Liu L

PDB-9ux7:
CryoEM Structure of LmuAB-DNA complex
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y

PDB-9ux8:
CryoEM Structure of LmuAB Apo State
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y

PDB-9uxh:
type II Lamassu, LmuACB with DNA
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uxi:
type II Lamassu, LmuA tetramer
Method: single particle / : Zhao X, Li S, Feng Y, Zhang K

PDB-9uxk:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uxl:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

EMDB-64760:
Cryo-EM density map of the 48-nm repeat of the human respiratory doublet microtubule
Method: single particle / : Shuo Y, Miao G

EMDB-64773:
Cryo-EM density map of the 48-nm repeat of the CCDC114-mutant PCD patient respiratory doublet microtubule with c.705_706insGCAG mutation
Method: single particle / : Shuo Y, Miao G

EMDB-64774:
Cryo-EM density map of the 96-nm repeat of the human respiratory doublet microtubule
Method: single particle / : Shuo Y, Miao G

EMDB-64775:
Cryo-EM density map of the 48-nm repeat of the CCDC114-mutant PCD patient respiratory doublet microtubule with c.-41-2A>C mutation
Method: single particle / : Shuo Y, Miao G

EMDB-64779:
Cyro-EM density map of the 96-nm repeat of the CCDC114-mutant PCD patient respiratory doublet microtubule with c.-41-2A>C mutation
Method: single particle / : Shuo Y, Miao G

EMDB-54629:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54630:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54631:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-54632:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6r:
Ternary cryo-EM structure of yeast ALG3 with Dol25-PP-GlcNAc2Man5, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6s:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man6, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6t:
Ternary cryo-EM structure of chicken ALG12 with Dol25-PP-GlcNAc2Man7, Dol25-P-Man, and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

PDB-9s6u:
Ternary cryo-EM structure of human ALG9 with Dol25-PP-GlcNAc2Man8, Dol25-P-Man and Fab
Method: single particle / : Alexander JAN, Chen SY, Mukherjee S, de Capitani M, Irobalieva RN, Rossi L, Agrawal P, Kowal J, Meirelles MA, Aebi M, Reymond JL, Kossiakoff AA, Riniker S, Locher KP

EMDB-70517:
Anthoceros agrestis Rubisco (8 RbcL and 8 RbcS1) head to head stacking.
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-70520:
A. agrestis Rubisco (8 RbcL 7 RbcS 1 RbcS-STAR)
Method: single particle / : Ang WSL, Oh ZG, Li FW, Gunn LH

EMDB-64748:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

PDB-9v33:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

EMDB-73040:
cryoEM map of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

EMDB-73041:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

PDB-9yjz:
cryoEM structure of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

PDB-9yk0:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

EMDB-66420:
IL-33 and Itepekimab fab and Tozorakimab fab ternary complex structure
Method: single particle / : Wang XQ, Wang Y

EMDB-66435:
IL-33 and Etokimab fab and Tozorakimab fab ternary complex structure
Method: single particle / : Wang XQ, Wang Y

PDB-9x05:
IL-33 and Itepekimab fab and Tozorakimab fab ternary complex structure
Method: single particle / : Wang XQ, Wang Y

PDB-9x0j:
IL-33 and Etokimab fab and Tozorakimab fab ternary complex structure
Method: single particle / : Wang XQ, Wang Y

EMDB-64623:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tekt1 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64624:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tekt5 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64625:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Tssk6 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-64626:
Cryo-EM structure of the 48-nm repeat doublet microtubule from Dusp21 KO mouse sperm
Method: single particle / : Liu Q, Gui M, Zhou LN

EMDB-66659:
Apo Retron-Eco8 complex
Method: single particle / : Yu Y, Chen Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more