[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 7,351 items for (author: xu & x)

EMDB-44372:
In-cell Saccharomyces cerevisiae nuclear pore complex with single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-44377:
In-cell Saccharomyces cerevisiae nuclear pore complex with double nuclear ring and basket
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-44379:
In-cell Mus musculus nuclear pore complex with nuclear basket
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-44381:
In-cell Toxoplasma gondii nuclear pore complex
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45197:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex with double nuclear ring and basket
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45198:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex with single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45199:
In-cell Saccharomyces cerevisiae nuclear pore complex cytoplasmic ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45200:
In-cell Saccharomyces cerevisiae nuclear pore complex inner ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45201:
In-cell Saccharomyces cerevisiae nuclear pore complex single nuclear ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45202:
In-cell Saccharomyces cerevisiae nuclear pore complex double nuclear ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45203:
In-cell Saccharomyces cerevisiae nuclear pore complex nuclear basket focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45204:
In-cell Saccharomyces cerevisiae nuclear pore complex membrane focused refinement for single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45205:
In-cell Saccharomyces cerevisiae nuclear pore complex membrane focused refinement for double nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45216:
In-cell Mus musculus nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45219:
In-cell Mus musculus nuclear pore complex cytoplasmic ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45220:
In-cell Mus musculus nuclear pore complex inner ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45222:
In-cell Mus musculus nuclear pore complex nuclear ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45223:
In-cell Mus musculus nuclear pore complex basket focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45227:
In-cell Mus musculus nuclear pore complex membrane focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45228:
In-cell Toxoplasma gondii symmetry-expanded nuclear pore complex
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45255:
In-cell Saccharomyces cerevisiae C8-symmetrised nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45256:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45257:
In-cell Mus musculus nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45258:
In-cell Mus musculus symmetry-expanded nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45259:
In-cell Toxoplasma gondii C8-symmetrised nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-60628:
Carazolol-activated human beta3 adrenergic receptor
Method: single particle / : Zheng S, Zhang S, Dai S, Chen K, Gao K, Lin B, Liu X

EMDB-60629:
Epinephrine-activated human beta3 adrenergic receptor
Method: single particle / : Zheng S, Zhang S, Dai S, Chen K, Gao K, Lin B, Liu X

EMDB-45962:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 5-12-18
Method: single particle / : Sun C, Jiang W

EMDB-45963:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18
Method: single particle / : Sun C, Jiang W

EMDB-45964:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18, DTT-treated
Method: single particle / : Sun C, Jiang W

EMDB-42284:
The structure of the Clostridium thermocellum AdhE spirosome
Method: single particle / : Ziegler SJ, Gruber JN

EMDB-39369:
The DSR2-DSAD1 complex with DSAD1 on the opposite sides
Method: single particle / : Zheng J, Yang X

EMDB-39380:
Local map of DSR2-DSAD1 complex
Method: single particle / : Zheng J, Yang X

EMDB-39381:
Overall map of DSR2-DSAD1 complex
Method: single particle / : Zheng J, Yang X

EMDB-39382:
The DSR2-DSAD1 complex with DSAD1 on the same sides
Method: single particle / : Yang X, Zheng J

EMDB-39385:
The structure of DSR2-Tail tube complex
Method: single particle / : Zheng J, Yang X

EMDB-39386:
The loacl refined map of DSR2 and NAD structure
Method: single particle / : Zheng J, Yang X

EMDB-39387:
The local refined map of DSR2 N-terminal domains
Method: single particle / : Zheng J, Yang X

EMDB-39390:
The structure of DSR2 and NAD+ complex
Method: single particle / : Zheng J, Yang X

EMDB-39718:
The tetramer complex of DSR2 and tube-forming domain of phage tail tube protein
Method: single particle / : Zheng J, Yang X

EMDB-60470:
The dimer complex of DSR2 and tube-forming domain of phage tail tube protein
Method: single particle / : Zheng J, Yang X

PDB-8ykf:
The DSR2-DSAD1 complex with DSAD1 on the opposite sides
Method: single particle / : Zheng J, Yang X

PDB-8yl5:
The DSR2-DSAD1 complex with DSAD1 on the same sides
Method: single particle / : Yang X, Zheng J

PDB-8yln:
The structure of DSR2-Tail tube complex
Method: single particle / : Zheng J, Yang X

PDB-8ylt:
The structure of DSR2 and NAD+ complex
Method: single particle / : Zheng J, Yang X

PDB-8z18:
The tetramer complex of DSR2 and tube-forming domain of phage tail tube protein
Method: single particle / : Zheng J, Yang X

PDB-8ztr:
The dimer complex of DSR2 and tube-forming domain of phage tail tube protein
Method: single particle / : Zheng J, Yang X

EMDB-37139:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37143:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37144:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlc1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more