[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 142 items for (author: winkler & h)

EMDB-51295:
Recombinant Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51296:
Nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51297:
Native monomeric Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51298:
Native dimeric Myeloperoxidase bound to nucleosome core particle; nucleosome focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51299:
Native dimeric Myeloperoxidase bound to nucleosome core particle; MPO focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51300:
Native dimeric Myeloperoxidase bound to nucleosome core particle; consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51301:
Native dimeric Myeloperoxidase bound to nucleosome core particle; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51302:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, nucleosome focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51303:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, map focused on MPO
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51304:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51305:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51306:
Native monomeric Myeloperoxidase bound to nucleosome core particle, late time point
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52865:
Nucleosome core particle bound by one molecule of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52866:
Nucleosome core particle bound by two molecules of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52867:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on nucleosome/MPO monomer
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52868:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on MPO dimer
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52869:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52870:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9gen:
Recombinant Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9geo:
Nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9gep:
Native monomeric Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9geq:
Native dimeric Myeloperoxidase bound to nucleosome core particle; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9ger:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9ihd:
Nucleosome core particle bound by one molecule of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9ihe:
Nucleosome core particle bound by two molecules of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

PDB-9ihf:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52589:
Cryo-tomogram of FIB-milled wild-type untreated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52590:
Cryo-tomogram of a FIB-milled stm1-deletion untreated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52591:
Cryo-tomogram of a FIB-milled wild-type rapamycin treated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-52592:
Cryo-tomogram of a FIB-milled stm1-deletion rapamycin treated yeast cell
Method: electron tomography / : Bonassera M, Peter M

EMDB-44441:
Cryo-EM structure of the S. cerevisiae ORC-Cdc6-Mcm2-7-DNA complex with a fully closed Mcm2-Mcm5 DNA entry gate
Method: single particle / : Yuan Z, Bai L, Li H, Speck C

PDB-9bcx:
Cryo-EM structure of the S. cerevisiae ORC-Cdc6-Mcm2-7-DNA complex with a fully closed Mcm2-Mcm5 DNA entry gate
Method: single particle / : Yuan Z, Bai L, Li H, Speck C

EMDB-17785:
Cryo-EM structure of styrene oxide isomerase bound to benzylamine inhibitor
Method: single particle / : Khanppnavar B, Korkhov V, Li X

EMDB-17786:
Cryo-EM structure of styrene oxide isomerase
Method: single particle / : Khanppnavar B, Korkhov B, Li X

PDB-8pnu:
Cryo-EM structure of styrene oxide isomerase bound to benzylamine inhibitor
Method: single particle / : Khanppnavar B, Korkhov V, Li X

PDB-8pnv:
Cryo-EM structure of styrene oxide isomerase
Method: single particle / : Khanppnavar B, Korkhov B, Li X

EMDB-14115:
Outward-facing apo-form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL

EMDB-14116:
Outward-facing auxin bound form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL

EMDB-14117:
Inward-facing NPA bound form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL

EMDB-14118:
Outward-facing apo-form of auxin transporter PIN8 in detergent
Method: single particle / : Ung KL, Winkler MBL, Dedic E, Stokes DL, Pedersen BP

PDB-7qp9:
Outward-facing apo-form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL, Dedic E, Stokes DL, Pedersen BP

PDB-7qpa:
Outward-facing auxin bound form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL, Dedic E, Stokes DL, Pedersen BP

PDB-7qpc:
Inward-facing NPA bound form of auxin transporter PIN8
Method: single particle / : Ung KL, Winkler MBL, Dedic E, Stokes DL, Pedersen BP

EMDB-23941:
Bartonella henselae NrnC bound to pGG. D4 Symmetry
Method: single particle / : Lormand JD, Brownfield B

EMDB-23942:
Bartonella henselae NrnC bound to pGG. C1 reconstruction.
Method: single particle / : Lormand JD, Brownfield B

EMDB-23943:
Bartonella henselae NrnC complexed with pAGG. D4 symmetry.
Method: single particle / : Lormand JD, Brownfield B

EMDB-23944:
Bartonella henselae NrnC complexed with pAGG. C1 reconstruction.
Method: single particle / : Lormand JD, Brownfield B

EMDB-23945:
Bartonella henselae NrnC complexed with pAAAGG. D4 symmetry.
Method: single particle / : Lormand JD, Brownfield B

EMDB-23946:
Bartonella henselae NrnC complexed with pAAAGG. C1 reconstruction.
Method: single particle / : Lormand JD, Brownfield B

EMDB-23947:
Bartonella henselae NrnC complexed with pAAAGG in the presence of Ca2+. D4 Symmetry.
Method: single particle / : Lormand JD, Brownfield B

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more