[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 474 items for (author: wang & ky)

EMDB-63426:
TMEM164-substrate
Method: single particle / : Zhang MF

PDB-9lw1:
TMEM164-substrate
Method: single particle / : Zhang MF

EMDB-54287:
Structure of human 1918 influenza A polymerase heterotrimer in complex with 1918 NEP.
Method: single particle / : Rep A, Wang F, Chen K, Carrique L, Grimes JM, Fodor E

EMDB-54376:
Structure of human 1918 influenza A polymerase heterotrimer in complex with WSN NEP.
Method: single particle / : Rep A, Wang F, Chen K, Carrique L, Grimes JM, Fodor E

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-71766:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

EMDB-71767:
Cryo-EM structure of J601-A6 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71772:
Cryo-EM structure of K001-A1 Fab in complex with HIV-1 459C-OPT RnS DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71781:
Cryo-EM structure of HIV-1 459C-WT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71782:
Cryo-EM structure of HIV-1 459C-ALT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pni:
Cryo-EM structure of J601-1B2 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD

PDB-9pnn:
Cryo-EM structure of J601-A6 Fab in complex with HIV-1 BG505 DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pnu:
Cryo-EM structure of K001-A1 Fab in complex with HIV-1 459C-OPT RnS DS-SOSIP Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pq2:
Cryo-EM structure of HIV-1 459C-WT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

PDB-9pq3:
Cryo-EM structure of HIV-1 459C-ALT DS-SOSIP RnS Env trimer
Method: single particle / : Wang S, Zhou T, Kwong PD, Morano NC, Shapiro L

EMDB-71899:
Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

PDB-9pw4:
Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

EMDB-71900:
The local refinement map of Structure of V30V4 in complex with SARS-CoV-2 spike
Method: single particle / : Wang YJ, Kibria G, Wesemann D, Chen B

EMDB-62603:
Cryo-EM structure of SLC30A10 in Mn2+-bound state, determined in inward-facing conformation
Method: single particle / : Yang H, Zhang JK, Shen X

EMDB-62604:
Cryo-EM structure of SLC30A10, determined in asymmetric conformations-one subunit in an inward-facing Mn2+-bound and the other in an outward-facing Mn2+-unbound conformation
Method: single particle / : Yang H, Zhang JK, Shen X

EMDB-62605:
Cryo-EM structure of SLC30A10 in the absence of Mn2+, determined in inward-facing conformation
Method: single particle / : Yang H, Zhang JK, Shen X

PDB-9kvx:
Cryo-EM structure of SLC30A10 in Mn2+-bound state, determined in inward-facing conformation
Method: single particle / : Yang H, Zhang JK, Shen X

PDB-9kvy:
Cryo-EM structure of SLC30A10, determined in asymmetric conformations-one subunit in an inward-facing Mn2+-bound and the other in an outward-facing Mn2+-unbound conformation
Method: single particle / : Yang H, Zhang JK, Shen X

PDB-9kvz:
Cryo-EM structure of SLC30A10 in the absence of Mn2+, determined in inward-facing conformation
Method: single particle / : Yang H, Zhang JK, Shen X

EMDB-46768:
azoRhuA-bCDRhuA co-assembled nanotubes, 11-start
Method: helical / : Zhang Z, Sonani RR, Wang F, Egelman EH, Tezcan FA

EMDB-46769:
azoRhuA-bCDRhuA co-assembled nanotubes, 12-start
Method: helical / : Zhang Z, Sonani RR, Wang F, Egelman EH, Tezcan FA

EMDB-48650:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

PDB-9mv0:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

EMDB-46826:
Focused region on azoRhuA-bCDRhuA co-assembled nanotubes
Method: single particle / : Zhang Z, Sonani RR, Wang F, Egelman EH, Tezcan FA

PDB-9dgh:
Focused region on azoRhuA-bCDRhuA co-assembled nanotubes
Method: single particle / : Zhang Z, Sonani RR, Wang F, Egelman EH, Tezcan FA

EMDB-46767:
azoRhuA-bCDRhuA co-assembled nanotubes, 10-start
Method: helical / : Zhang Z, Sonani RR, Wang F, Egelman EH, Tezcan FA

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

PDB-9nb9:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-45105:
Cryo-electron tomography of Candida glabrata plasma membrane
Method: electron tomography / : Jiang J, Keniya MV, Perlin DS, Dai W

EMDB-45106:
Cryo-electron tomography of plasma membranes generated from caspofungin-treated Candida glabrata spheroplasts
Method: electron tomography / : Jiang J, Keniya MV, Perlin DS, Dai W

EMDB-46907:
4 Angstrom structure of the human TRPV3 pentamer
Method: single particle / : Lansky S, Clarke OB, Scheuring S

PDB-9dij:
4 Angstrom structure of the human TRPV3 pentamer
Method: single particle / : Lansky S, Clarke OB, Scheuring S

EMDB-62246:
Cryo-EM structure of docked mouse bestrophin-1 in a partial open state
Method: single particle / : Lim HH, Kim KW, Ko A

EMDB-62247:
Cryo-EM structure of docked mouse bestrophin-1 in a closed state
Method: single particle / : Lim HH, Kim KW, Ko A

EMDB-62483:
Cryo-EM structure of mouse bestrophin-1 in a closed state
Method: single particle / : Lim HH, Kim KW, Ko A

PDB-9kc9:
Cryo-EM structure of docked mouse bestrophin-1 in a partial open state
Method: single particle / : Lim HH, Kim KW, Ko A

PDB-9kca:
Cryo-EM structure of docked mouse bestrophin-1 in a closed state
Method: single particle / : Lim HH, Kim KW, Ko A

PDB-9kp6:
Cryo-EM structure of mouse bestrophin-1 in a closed state
Method: single particle / : Lim HH, Kim KW, Ko A

EMDB-41059:
Cryo-EM structure of RNA device 43, holo state
Method: single particle / : Stagno JR, Deme JC, Lee YT, Wang YX, Lea SM

EMDB-41353:
Cryo-EM structure of RNA device 43, apo state
Method: single particle / : Stagno JR, Deme JC, Lee YT, Wang YX, Lea SM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more