[日本語] English
EMN検索
- 3次元電子顕微鏡データ検索 -

-
検索条件


キーワード
データベース /
Q: EM Navigatorの情報源は?
データエントリ / 週前
Q: データの更新はいつですか?
著者・登録者
解析手法
表示モード
並び順
エントリ数 / 1ページ
登録情報
文献
試料
実験
解析
データの最大数全データの場合は0
ファイル形式
  • CSV形式 (コンマ区切り, Excelなどに)
  • TSV形式 (タブ区切り)
  • JSON形式

万見検索

-
検索結果

検索 (著者・登録者: waksman & g)の結果88件中、1から50件目までを表示しています

EMDB-19758:
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex

PDB-8s6h:
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex

EMDB-19478:
O-Layer C14 at 2.46A - Local refinement with C14 symmetry of the O-layer of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-19479:
I-Layer C16 at 2.69A - Local refinement with C16 symmetry of the I-layer of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-19480:
Conformation-A OMCC at 3.18A - Refinement without symmetry of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-19481:
Conformation-B of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

EMDB-19482:
Conformation-C OMCC at 3.05A - Refinement without symmetry of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-19483:
Stalk C5 at 2.97A - Local refinement with C5 symmetry of the Stalk complex from the fully-assembled R388 type IV secretion system.

EMDB-19484:
Arches-protomer at 6.22A - Refinement without symmetry of the Arches-protomer complex from the fully-assembled R388 type IV secretion system.

EMDB-19485:
Extended inner membrne complex (IMC) protomer at 3.83A - Refinement without symmetry of the extended IMC-protomer complex from the fully-assembled R388 type IV secretion system.

EMDB-19488:
Stalk-Arches-IMC at 4.33A - Refinement without symmetry of the Stalk-Arches-IMC from the fully-assembled R388 type IV secretion.

PDB-8rt4:
O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rt5:
I-layer structure (TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rt6:
Conformation-A of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rt7:
Conformation-B of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rt8:
Conformation-C of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rt9:
Stalk complex full-length structure (TrwJ/VirB5-TrwI/VirB6) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rta:
Arches-protomer complex full-length structure (TrwJ/VirB8) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rtb:
Extended inner membrane complex (IMC) protomer structure (TrwM/VirB3-TrwK/VirB4-TrwI/VirB6-TrwG/VirB8-TrwE/VirB10) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-8rtd:
Stalk-Arches-IMC structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.

EMDB-17863:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod

EMDB-17878:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod

PDB-8psv:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod

PDB-8ptu:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod

EMDB-12707:
O-Layer C14 at 2.58A - Local refinement with C14 symmetry of the O-layer of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-12708:
I-Layer C16 at 3.08A - Local refinement with C16 symmetry of I-layer of the outer membrane core complex from the fully-assembled R388 type IV secretion system.

EMDB-12709:
Stalk C1 at 3.71A - Local refinement without symmetry of the Stalk complex from the fully-assembled R388 type IV secretion system.

EMDB-12715:
IMC-Arches C6 at 8.33A - Refinement with C6 symmetry of the Inner Membrane Complex (IMC) with the Arches from the fully-assembled R388 type IV secretion system.

EMDB-12716:
Trimer of dimers TrwK/VirB4unbound C1 at 4.14A - Refinement without symmetry of TrwK/VirB4unbound trimer of dimers complex (with Hcp1) from the R388 type IV secretion system.

EMDB-12717:
Dimer TrwK/VirB4unbound C1 at 3.49A - Local refinement without symmetry of the TrwK/VirB4unbound dimer complex from the R388 type IV secretion system.

EMDB-12933:
IMC protomer C1 at 3.75A - Local refinement without symmetry of the inner membrane complex (IMC) protomer from the fully-assembled R388 type IV secretion system.

EMDB-13765:
OMCC C1 at 3.28A - Refinement without symmetry of the outer membrane core complex (O- and I-layer) from the fully-assembled R388 type IV secretion system.

EMDB-13766:
Ab Initio model for IMC-Arches-Stalk from the fully-assembled R388 type IV secretion system determined by cryo-EM.

EMDB-13767:
IMC-Arches-Stalk C1 at 6.18A - Refinement of the IMC, Arches and Stalk complex without symmetry from the fully-assembled R388 type IV secretion system.

EMDB-13768:
Stalk C5 at 3.28A - Local refinement with C5 symmetry of the Stalk complex from the fully-assembled R388 type IV secretion system.

PDB-7o3j:
O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-7o3t:
I-layer structure (TrwF/VirB9NTD, TrwE/VirB10NTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-7o3v:
Stalk complex structure (TrwJ/VirB5-TrwI/VirB6) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-7o41:
Hexameric composite model of the Inner Membrane Complex (IMC) with the Arches from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-7o42:
TrwK/VirB4unbound trimer of dimers complex (with Hcp1) from the R388 type IV secretion system determined by cryo-EM.

PDB-7o43:
TrwK/VirB4unbound dimer complex from R388 type IV secretion system determined by cryo-EM.

PDB-7oiu:
Inner Membrane Complex (IMC) protomer structure (TrwM/VirB3, TrwK/VirB4, TrwG/VirB8tails) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

PDB-7q1v:
Arches protomer (trimer of TrwG/VirB8peri) structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.

EMDB-13083:
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains

EMDB-13858:
L. pneumophila Type IV Coupling Complex (T4CC) computed from WT particles where DotY/Z is missing (referred to as T4CCWTminusYZ at 6.3A)

EMDB-13859:
L. pneumophila Type IV Coupling Complex (T4CC) computed from a sample where dotY/Z genes were deleted (referred to as T4CCdeltaDotYZ at 15A)

PDB-7ovb:
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains

EMDB-10721:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod

PDB-6y7s:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod

EMDB-10350:
Type IV Coupling Complex (T4CC) from L. pneumophila.

ページ:

+
EMN検索について

-
お知らせ

-
2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

-
2021年10月5日: 温度感受性及び、機械刺激依存性イオンチャネルに関するノーベル賞

温度感受性及び、機械刺激依存性イオンチャネルに関するノーベル賞

  • 2021年のノーベル医学・生理学賞は、温度と触覚の受容体を発見したデビッド・ジュリアスとアーデム・パタポウティアンに共同で授与されました
  • EM Navigatorでは、両先駆者によるクライオEM構造データを見つけることができます

外部リンク:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

+
2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月:コロナウイルスプロテーアーゼ

+
2019年7月5日: テキストデータのダウンロード

テキストデータのダウンロード

EM Navigatorの以下のサービスのデータが、テキスト形式でダウンロードできるようになりました。ダウンロードしたデータをExcelなどで読み込むことができます。

ページデータフォーマット
EM Navigator 検索検索結果CSV, TSV, JSON
EM Navigator 統計情報表データCSV, TSV

関連情報:EMN検索 / EMN統計情報

-
EMN検索

3次元電子顕微鏡データ検索

豊富な検索条件と表示条件で、EMDBとPDBの電子顕微鏡エントリを検索できます。

関連情報:EMDB / PDB / EM Navigator / Q: EM Navigatorの情報源は? / 万見検索 / 2019年7月5日: テキストデータのダウンロード

他の情報も見る