[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 121 items for (author: vogel & d)

EMDB-19419:
sub-tomogram averaging results of tetrameric 5-HT3A receptor on cell-derived vesicles

EMDB-19420:
Sub-tomogram averaging results of pentameric 5-HT3A receptor on cell-derived vesicles

EMDB-16384:
Tetrameric 5-HT3A receptor in Salipro (apo, asymmetric)

EMDB-16385:
Tetrameric 5-HT3aR in Salipro (apo state, symmetric)

EMDB-16386:
Tetrameric 5-HT3aR in Salipro (holo state, symmetric)

EMDB-16387:
Tetrameric 5-HT3A receptor in Salipro (holo, asymmetric)

PDB-8c1w:
Tetrameric 5-HT3A receptor in Salipro (apo, asymmetric)

PDB-8c1z:
Tetrameric 5-HT3aR in Salipro (apo state, symmetric)

PDB-8c20:
Tetrameric 5-HT3aR in Salipro (holo state, symmetric)

PDB-8c21:
Tetrameric 5-HT3A receptor in Salipro (holo, asymmetric)

EMDB-19129:
A DNA Robotic Switch with Regulated Autonomous Display of Cytotoxic Ligand Nanopatterns

EMDB-43385:
Cryo-EM map of close dodecameric CaMKII beta holoenzyme T287A T306A T307A

EMDB-40873:
Cryo-EM structure of tetradecameric hub domain of CaMKII alpha

EMDB-41070:
Cryo-EM structure of tetradecameric CaMKII beta holoenzyme T287A T306A T307A

EMDB-41077:
Cryo-EM structure of dodecameric CaMKII beta holoenzyme T287A T306A T307A

PDB-8syg:
Cryo-EM structure of tetradecameric hub domain of CaMKII alpha

PDB-8t6k:
Cryo-EM structure of tetradecameric CaMKII beta holoenzyme T287A T306A T307A

PDB-8t6q:
Cryo-EM structure of dodecameric CaMKII beta holoenzyme T287A T306A T307A

EMDB-40955:
Cryo-EM structure of dodecameric hub domain of CaMKII alpha

EMDB-40956:
Cryo-EM structure of tetradecameric hub domain of CaMKII beta

EMDB-40957:
Cryo-EM structure of dodecameric hub domain of CaMKII beta

PDB-8t15:
Cryo-EM structure of dodecameric hub domain of CaMKII alpha

PDB-8t17:
Cryo-EM structure of tetradecameric hub domain of CaMKII beta

PDB-8t18:
Cryo-EM structure of dodecameric hub domain of CaMKII beta

EMDB-18963:
Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)]

EMDB-18967:
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]

EMDB-18969:
Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]

PDB-8r6u:
Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)]

PDB-8r6w:
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]

PDB-8r6y:
Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]

EMDB-16670:
Structure of the SNV L protein bound to 5' RNA

PDB-8ci5:
Structure of the SNV L protein bound to 5' RNA

EMDB-34202:
AK-42 inhibitor binding human ClC-2 TMD

PDB-8gqu:
AK-42 inhibitor binding human ClC-2 TMD

EMDB-25427:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2

PDB-7stf:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2

EMDB-33223:
TMD masked refine map of human ClC-2

EMDB-33169:
Full length human CLC-2 channel in apo state

EMDB-33276:
Cryo-EM structure of human pannexin 2

EMDB-15607:
Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK]

EMDB-15608:
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]

EMDB-15610:
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]

EMDB-15614:
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]

EMDB-15615:
Structure of the SFTSV L protein bound in a resting state [RESTING]

PDB-8as6:
Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK]

PDB-8as7:
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]

PDB-8asb:
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]

PDB-8asd:
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]

PDB-8asg:
Structure of the SFTSV L protein bound in a resting state [RESTING]

EMDB-14726:
Cryo-EM structure of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more