[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 83 items for (author: valli & d)

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-18671:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8qvp:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-19354:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8rm9:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-19353:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8rm8:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S28P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-18673:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 3
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8qvr:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 3
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-18672:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8qvq:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-18827:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant A25P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8r1s:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant A25P, polymorph 2
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-18441:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant A25P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8qj1:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant A25P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-18060:
CryoEM structure of canonical rice nucleosome core particle
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

EMDB-18061:
CryoEM structure of rice nucleosome containing a H4 variant chimera
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

PDB-8q15:
CryoEM structure of canonical rice nucleosome core particle
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

PDB-8q16:
CryoEM structure of rice nucleosome containing a H4 variant chimera
Method: single particle / : Sotelo-Parrilla P, Hari Sundar G V, Raju S, Jha S, Gireesh A, Gut F, Vinothkumar KR, Berger F, Shivaprasad PV, Jeyaprakash AA

EMDB-41656:
RNA origami 3-helix tile Traptamer
Method: single particle / : McRae EKS, Vallina NS, Andersen ES

PDB-8tvz:
RNA origami 3-helix tile Traptamer
Method: single particle / : McRae EKS, Vallina NS, Andersen ES

EMDB-18887:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP)
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8r4i:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP)
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-16245:
Double-motif Single-stranded Paranemic Crossover RNA Triangle (2PXT)
Method: single particle / : Sampedro N, Andersen ES, McRae EKS

PDB-8bu8:
Double-motif Single-stranded Paranemic Crossover RNA Triangle (2PXT)
Method: single particle / : Sampedro N, Andersen ES, McRae EKS

EMDB-16089:
Human full length RAD52 undecamer
Method: single particle / : Marotta R, Balboni B, Girotto S, Cavalli A

PDB-8bjm:
Human full length RAD52 undecamer.
Method: single particle / : Marotta R, Balboni B, Girotto S, Cavalli A

EMDB-35545:
Cryo-EM structure of PI3Kalpha in complex with compound 17
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

PDB-8ils:
Cryo-EM structure of PI3Kalpha in complex with compound 17
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

EMDB-35547:
Cryo-EM structure of PI3Kalpha in complex with compound 18
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

PDB-8ilv:
Cryo-EM structure of PI3Kalpha in complex with compound 18
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

EMDB-35543:
Cryo-EM structure of PI3Kalpha in complex with compound 16
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

PDB-8ilr:
Cryo-EM structure of PI3Kalpha in complex with compound 16
Method: single particle / : Zhou Q, Liu X, Neri D, Li W, Favalli N, Bassi G, Yang S, Yang D, Vogt PK, Wang MW

EMDB-14740:
Ligand bound state of a brocolli-pepper aptamer FRET tile
Method: single particle / : McRae EKS, Vallina NS, Hansen BK, Boussebayle A, Andersen ES

EMDB-14741:
Unbound state of a brocolli-pepper aptamer FRET tile
Method: single particle / : McRae EKS, Vallina NS, Hansen BK, Boussebayle A, Andersen ES

PDB-7zj4:
Ligand bound state of a brocolli-pepper aptamer FRET tile
Method: single particle / : McRae EKS, Vallina NS, Hansen BK, Boussebayle A, Andersen ES

PDB-7zj5:
Unbound state of a brocolli-pepper aptamer FRET tile.
Method: single particle / : McRae EKS, Vallina NS, Hansen BK, Boussebayle A, Andersen ES

EMDB-28669:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 01)
Method: electron tomography / : Liu J, Ren G

EMDB-28670:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 02)
Method: electron tomography / : Liu J, Ren G

EMDB-28671:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 03)
Method: electron tomography / : Liu J, Ren G

EMDB-28672:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 04)
Method: electron tomography / : Liu J, Ren G

EMDB-28673:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 05)
Method: electron tomography / : Liu J, Ren G

EMDB-28674:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 06)
Method: electron tomography / : Liu J, Ren G

EMDB-28675:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 07)
Method: electron tomography / : Liu J, Ren G

EMDB-28676:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 08)
Method: electron tomography / : Liu J, Ren G

EMDB-28677:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 09)
Method: electron tomography / : Liu J, Ren G

EMDB-28678:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 10)
Method: electron tomography / : Liu J, Ren G

EMDB-28679:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 11)
Method: electron tomography / : Liu J, Ren G

EMDB-28680:
Single-Molecule 3D Image of 16 Helix RNA Origami Satellite by Individual Particle Electron Tomography (No. 12)
Method: electron tomography / : Liu J, Ren G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more