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Showing all 43 items for (author: trono & d)

EMDB-17819:
XBB 1.0 RBD bound to P4J15 (Local)

EMDB-17849:
XBB 1.0 RBD bound to P4J15 (Global)

EMDB-17850:
SARS-CoV-2 XBB 1.0 closed conformation.

PDB-8pq2:
XBB 1.0 RBD bound to P4J15 (Local)

PDB-8psd:
SARS-CoV-2 XBB 1.0 closed conformation.

EMDB-15592:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local)

PDB-8aqw:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local)

EMDB-14922:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map

PDB-7zrv:
cryo-EM structure of omicron spike in complex with de novo designed binder, full map

EMDB-14930:
cryo-EM structure of omicron spike in complex with de novo designed binder, local

EMDB-14947:
cryo-EM structure of D614 spike in complex with de novo designed binder, full and local maps(addition)

PDB-7zsd:
cryo-EM structure of omicron spike in complex with de novo designed binder, local

PDB-7zss:
cryo-EM structure of D614 spike in complex with de novo designed binder

EMDB-15588:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local)

EMDB-15589:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (local)

EMDB-15590:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)

EMDB-15591:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)

PDB-8aqs:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local)

PDB-8aqt:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (local)

PDB-8aqu:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)

PDB-8aqv:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local)

EMDB-15541:
Beta SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)

EMDB-15580:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)

EMDB-15581:
BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (three up, full)

EMDB-15584:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)

EMDB-15585:
BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (three up, full)

EMDB-15586:
BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (two up, full)

EMDB-15587:
BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (three up, full)

EMDB-14141:
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)

EMDB-14142:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)

EMDB-14143:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD down - 1-P2G3 Fab (Local)

PDB-7qti:
SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global)

PDB-7qtj:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD up - 1-P2G3 and 1-P5C3 Fabs (Local)

PDB-7qtk:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD down - 1-P2G3 Fab (Local)

EMDB-14087:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)

PDB-7qo9:
SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)

EMDB-14086:
SARS-CoV-2 S Omicron Spike B.1.1.529

PDB-7qo7:
SARS-CoV-2 S Omicron Spike B.1.1.529

EMDB-13190:
P5C3 is a potent fab neutralizer

EMDB-13265:
the local resolution of Fab p5c3.

EMDB-13415:
MaP OF P5C3RBD Interface

PDB-7p40:
P5C3 is a potent fab neutralizer

PDB-7phg:
MaP OF P5C3RBD Interface

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

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URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

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Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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