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Showing all 35 items for (author: toor & n)

EMDB-75574:
gRNAde designed RNA molecule
Method: single particle / : Spellmon N, Haack DB, Joshi CK, Hingey J, Rudolfs B, Mancino A, Toor N, Yu Z, Das R

EMDB-75575:
MPNN-fixbb designed RNA molecule
Method: single particle / : Haack DB, Spellmon N, Favor AH, Kubaney A, Baker D, Rudolfs B, Hingey J, Mancino A, Yu Z, Toor N, Das R

EMDB-75584:
MPNN-RFdiff designed RNA molecule
Method: single particle / : Hingey J, Spellmon N, Favor AH, Kubaney A, Baker D, Haack DB, Rudolfs B, Mancino A, Yu Z, Toor N, Das R

PDB-10zt:
gRNAde designed RNA molecule
Method: single particle / : Spellmon N, Haack DB, Joshi CK, Rudolfs B, Hingey J, Mancino A, Yu Z, Toor N, Das R

PDB-10zu:
MPNN-fixbb designed RNA molecule
Method: single particle / : Haack DB, Spellmon N, Favor AH, Kubaney A, Baker D, Rudolfs B, Hingey J, Mancino A, Yu Z, Toor N, Das R

PDB-11ag:
MPNN-RFdiff designed RNA molecule
Method: single particle / : Hingey J, Spellmon N, Favor AH, Kubaney A, Baker D, Haack DB, Rudolfs B, Mancino A, Yu Z, Toor N, Das R

EMDB-75648:
Struct2SeQ designed RNA molecule
Method: single particle / : Mancino A, Hingey J, He S, Haack DB, Rudolfs B, Spellmon N, Yu Z, Toor N, Das R

PDB-11eh:
Struct2SeQ designed RNA molecule
Method: single particle / : Mancino A, Hingey J, He S, Haack DB, Rudolfs B, Spellmon N, Yu Z, Toor N, Das R

EMDB-52275:
Structure of Ba1Cas12a3 binary complex
Method: single particle / : Yuan B, Heinz DW

EMDB-52285:
Structure of tRNA bound Ba1Cas12a3
Method: single particle / : Yuan B, Heinz DW

EMDB-52286:
Structure of cleaved tRNA fragment bound Ba1Cas12a3
Method: single particle / : Yuan B, Heinz DW

EMDB-52287:
Structure of Ba1Cas12a3 ternary complex
Method: single particle / : Yuan B, Heinz DW

PDB-9hlx:
Structure of Ba1Cas12a3 binary complex
Method: single particle / : Yuan B, Heinz DW

PDB-9hm4:
Structure of tRNA bound Ba1Cas12a3
Method: single particle / : Yuan B, Heinz DW

PDB-9hm5:
Structure of cleaved tRNA fragment bound Ba1Cas12a3
Method: single particle / : Yuan B, Heinz DW

PDB-9hm6:
Structure of Ba1Cas12a3 ternary complex
Method: single particle / : Yuan B, Heinz DW

EMDB-45250:
Cryo-EM structure of the apo TPP riboswitch embedded in an RNA scaffold
Method: single particle / : Toor N

EMDB-45251:
Cryo-EM Structure of a group IIC intron embedded in an RNP scaffold
Method: single particle / : Toor N

EMDB-45994:
Small dataset reconstruction of the RaiA RNA motif
Method: single particle / : Rudolfs B, Haack DB, Toor N

EMDB-45988:
Cryo-EM structure of the Rail RNA motif
Method: single particle / : Rudolfs B, Haack DB, Toor N

PDB-9cxf:
Cryo-EM structure of the Rail RNA motif
Method: single particle / : Rudolfs B, Haack DB, Toor N

EMDB-45247:
Cryo-EM structure of a group IIC intron RNA
Method: single particle / : Toor N

EMDB-45248:
Group IIC intron embedded with the TPP riboswitch
Method: single particle / : Toor N

EMDB-45249:
Cryo-EM structure of the TPP riboswitch embedded in an RNA scaffold bound to thiamine pyrophosphate
Method: single particle / : Toor N

PDB-9c6i:
Cryo-EM structure of a group IIC intron RNA
Method: single particle / : Toor N

PDB-9c6j:
Group IIC intron embedded with the TPP riboswitch
Method: single particle / : Toor N

PDB-9c6k:
Cryo-EM structure of the TPP riboswitch embedded in an RNA scaffold bound to thiamine pyrophosphate
Method: single particle / : Toor N

EMDB-29279:
Cryo-EM structure of a group II intron immediately before branching
Method: single particle / : Haack DB, Rudolfs BG, Zhang C, Lyumkis D, Toor N

PDB-8fli:
Cryo-EM structure of a group II intron immediately before branching
Method: single particle / : Haack DB, Rudolfs BG, Zhang C, Lyumkis D, Toor N

EMDB-22992:
Cryo-EM structure of a thermostable encapsulin from T. maritima
Method: single particle / : Wiryaman TI, Toor N

PDB-7kq5:
Cryo-EM structure of a thermostable encapsulin from T. maritima
Method: single particle / : Wiryaman TI, Toor N

EMDB-9105:
Structure of a group II intron retroelement prior to DNA integration
Method: single particle / : Haack D, Yan X

EMDB-9106:
Structure of a group II intron retroelement after DNA integration
Method: single particle / : Haack D, Yan X

PDB-6me0:
Structure of a group II intron retroelement prior to DNA integration
Method: single particle / : Haack D, Yan X, Zhang C, Hingey J, Lyumkis D, Baker TS, Toor N

PDB-6mec:
Structure of a group II intron retroelement after DNA integration
Method: single particle / : Haack D, Yan X, Zhang C, Hingey J, Lyumkis D, Baker TS, Toor N

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About EMN search

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News

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

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EMN Search

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Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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