[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 166 items for (author: sun & pp)

EMDB-64397:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64398:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64399:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upm:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upn:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upo:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-70624:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70625:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70627:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-75014:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omy:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omz:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9on2:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9zzr:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-73884:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor1
Method: single particle / : Park S, Ward AB

EMDB-74737:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor3
Method: single particle / : Park S, Ward AB

EMDB-74738:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor8
Method: single particle / : Park S, Ward AB

EMDB-74739:
SARS-CoV-2 S2 in complex with COV2-2509
Method: single particle / : Park S, Ward AB

EMDB-74740:
Stabilized SARS-CoV-2 S2 apo
Method: single particle / : Park S, Ward AB

EMDB-75193:
SARS-CoV-2 spike S2 subunit in complex with polyclonal Fabs (Apex-A epitope)
Method: single particle / : Park S, Ward AB

EMDB-75194:
SARS-CoV-2 spike S2 subunit in complex with polyclonal Fabs (Apex-B epitope)
Method: single particle / : Park S, Ward AB

EMDB-75295:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor2
Method: single particle / : Park S, Ward AB

PDB-10mu:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor2
Method: single particle / : Park S, Ward AB

PDB-9z80:
SARS-CoV-2 S2 in complex with polyclonal Fab_Donor1
Method: single particle / : Park S, Ward AB

PDB-9zt5:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor3
Method: single particle / : Park S, Ward AB

PDB-9zt6:
SARS-CoV-2 S2 in complex with polyclonal Fab-B_Donor8
Method: single particle / : Park S, Ward AB

PDB-9zt7:
SARS-CoV-2 S2 in complex with COV2-2509
Method: single particle / : Park S, Ward AB

PDB-9zt8:
Stabilized SARS-CoV-2 S2 apo
Method: single particle / : Park S, Ward AB

EMDB-54112:
CryoEM structure of the microtubule-AKAP13 C1 domain complex
Method: single particle / : Giono M, Choi SR, Filipcik P, Steinmetz MO

EMDB-51768:
Cryo-EM structure of taxol-microtubules in complex with the C1 domain of GEFH1
Method: single particle / : Choi SR, Blum T, Steinmetz MO

PDB-9h1o:
Cryo-EM structure of taxol-microtubules in complex with the C1 domain of GEFH1
Method: single particle / : Choi SR, Blum T, Steinmetz MO

EMDB-63055:
bovine ABCC1 bound to CDAS
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63056:
bovine ABCC1 bound to 2'3'-CDAS (in the presence of GSH)
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63057:
bovine ABCC1 bound to estrogen sulfate and GSH
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63058:
bovine ABCC1 bound to GSSG
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63059:
bovine ABCC1 bound to verapamil and GSH
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63060:
bovine ABCC1 bound to leukotriene C4
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63061:
bovine ABCC1 bound to vincristine and GSH
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63062:
wild-type bovine ABCC1 under an active turnover conformation with unhydrolyzed ATP bound and hydrolyzed ADP released
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63063:
wild-type bovine ABCC1 bound to two ATP molecules -1
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63064:
wild type bovine ABCC1 bound to two ATP molecules -2
Method: single particle / : Sun PP, Liu KX, Gao P

EMDB-63770:
Cryo-EM structure of Gi-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63771:
Cryo-EM structure of complex of transducer-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63772:
Cryo-EM structure of antagonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63773:
Cryo-EM structure of agonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63774:
Cryo-EM structure of Apo-GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more