[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 121 items for (author: sun & jc)

EMDB-29330:
N332-GT5 SOSIP in complex with base polyclonal Fabs isolated at day 42 from protein immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29333:
N332-GT5 SOSIP in complex with base polyclonal Fabs isolated at day 42 from protein immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29334:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 16 from mRNA immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-29335:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 42 from mRNA immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-43191:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 14 from N332-GT2 nanoparticle-immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-43192:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 15 from N332-GT5 nanoparticle-immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-28937:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 42 from protein immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-28938:
N332-GT5 SOSIP in complex with V1V3 and base polyclonal Fabs isolated at day 16 from protein immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-28939:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 42 from mRNA immunized wild type mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-28940:
N332-GT5 SOSIP in complex with V1V3 polyclonal Fabs isolated at day 16 from mRNA immunized BG18HCgl knock-in mice
Method: single particle / : Torres JL, Jackson AM, Ozorowski G, Ward AB

EMDB-28941:
HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab
Method: single particle / : Torres JL, Ozorowski G, Ward AB

EMDB-28942:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized BG18HCgl knock-in mice
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-28945:
HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized wild type mice, and NHP monoclonal Fab RM20A3
Method: single particle / : Ozorowski G, Ward AB

EMDB-43190:
HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-28138:
3D reconstruction of the apical complex of Plasmodium falciparum (3D7) free merozoite
Method: electron tomography / : Segev-Zarko L, Sun SY, Kim CY

EMDB-28141:
3D reconstruction of the apical complex of Plasmodium falciparum (3D7) free merozoite
Method: electron tomography / : Segev-Zarko L, Sun SY, Kim CY

EMDB-28142:
3D Reconstruction of Plasmodium falciparum (3D7) free merozoite
Method: electron tomography / : Segev-Zarko L, Sun SY, Kim CY

EMDB-41048:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

EMDB-18323:
Chimeric Adenovirus-derived dodecamer
Method: single particle / : Buzas D, Borucu U, Bufton J, Kapadalakere SY, Toelzer C

EMDB-28125:
Plasmodium falciparum merozoites apical 2-ring units
Method: subtomogram averaging / : Sun SY, Pintilie GD

EMDB-28126:
Toxoplasma apical rings
Method: subtomogram averaging / : Sun SY, Pintilie GD

EMDB-41153:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-41154:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-41302:
Lassa GPC trimer in complex with Fab GP23
Method: single particle / : Gorman J, Kwong PD

EMDB-26859:
Ligand-free Lassa GPC Trimer with C3 Symmetry
Method: single particle / : Gorman J, Kwong PD

EMDB-26740:
Ligand-free Lassa GPC Trimer with C1 Symmetry
Method: single particle / : Gorman J, Kwong PD

EMDB-28900:
Propionate bound to human olfactory receptor OR51E2 in complex with miniGs399 (transmembrane domain)
Method: single particle / : Billesboelle CB, Manglik A

EMDB-28139:
Toxoplasma gondii apical complex (ionophore stimulated)
Method: electron tomography / : Segev-Zarko L, Sun SY, Kim CY, Egan ES, Chiu W, Boothroyd JC

EMDB-28140:
Toxoplasma gondii apical complex (non-stimulated)
Method: electron tomography / : Segev-Zarko L, Sun SY, Chiu W, Boothroyd JC

EMDB-28896:
Human olfactory receptor OR51E2 bound to propionate in complex with miniGs399
Method: single particle / : Billesboelle CB, Manglik A

EMDB-15042:
Icosahedral reconstruction of bacteriophage phiCjT23 capsid
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15044:
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 1
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15045:
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 2
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15046:
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 3
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15047:
Localized reconstruction of bacteriophage phiCjT23 major capsid protein trimer type 4
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15048:
Bacteriophage phiCjT23 spike protein penton domain
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15049:
Localized reconstruction of bacteriophage phiCjT23 spike
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15050:
Composite map of bacteriophage phiCjT23 capsid calculated from localized reconstructions
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

EMDB-15051:
Localized reconstruction of flavobacterium infecting lipid-containing phage FLiP vertex
Method: single particle / : Kejzar N, Abrishami V, Selvaraj M, Huiskonen JT

PDB-7zzz:
Bacteriophage phiCjT23 capsid
Method: single particle / : Rissanen I, Kejzar N, Huiskonen JT

PDB-8a01:
Bacteriophage phiCjT23 major capsid protein trimer type 1
Method: single particle / : Rissanen I, Kejzar N, Huiskonen JT

PDB-8a02:
Bacteriophage phiCjT23 major capsid protein trimer type 2
Method: single particle / : Rissanen I, Kejzar N, Huiskonen JT

PDB-8a03:
Bacteriophage phiCjT23 major capsid protein trimer type 3
Method: single particle / : Rissanen I, Kejzar N, Huiskonen JT

PDB-8a04:
Bacteriophage phiCjT23 major capsid protein trimer type 4
Method: single particle / : Rissanen I, Kejzar N, Huiskonen JT

PDB-8a05:
Bacteriophage phiCjT23 spike protein penton domain
Method: single particle / : Rissanen I, Huiskonen JT

PDB-8a06:
Flavobacterium infecting lipid-containing phage FLiP penton protein
Method: single particle / : Rissanen I, Huiskonen JT

EMDB-25622:
Negative Stain EM reconstruction of ApexGT3 in complex with two copies of PG9 Fab
Method: single particle / : Berndsen ZT

EMDB-25107:
Lassa virus glycoprotein construct(Josiah GPCysR4) recovered from GPC-I53-50 nanoparticle by localized reconstruction
Method: single particle / : Antanasijevic A, Brouwer PJM, Ward AB

EMDB-25108:
I53-50 nanoparticle core reconstructed from GPC-I53-50NP by focused refinement
Method: single particle / : Antanasijevic A, Brouwer PJM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more