[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 7,391 items for (author: sun & a)

EMDB-73059:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-FAT10(t)/FAT10(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

EMDB-73060:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-Ub(t)/Ub(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

EMDB-73079:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/FAT10(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

EMDB-73081:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/Ub(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

PDB-9ykv:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-FAT10(t)/FAT10(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

PDB-9ykw:
Cryo-EM structure of double-loaded human UBA6-UBE2Z-Ub(t)/Ub(a) thioester mimetic complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

PDB-9ylb:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/FAT10(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Nayak D, Bury PS, Nayak A, Wasmuth EV, Olsen SK

PDB-9ylf:
Cryo-EM structure of single-loaded human UBA6-UBE2Z/Ub(a) adenylate complex.
Method: single particle / : Jia L, Ruben EA, Bury PS, Nayak D, Wasmuth EV, Olsen SK

EMDB-80806:
Structure of a human monoclonal neutralizing antibody S54 targeting Epstein-Barr virus major glycoprotein gp350
Method: single particle / : Sun C, Fang XY, Liu Z, Zeng MS

PDB-26pf:
Structure of a human monoclonal neutralizing antibody S54 targeting Epstein-Barr virus major glycoprotein gp350
Method: single particle / : Sun C, Fang XY, Liu Z, Zeng MS

EMDB-67250:
Human minor spliceosome branching-completed C complex (after step-I)
Method: single particle / : Bai R, Wan R

EMDB-67263:
Human minor spliceosome exon-ligation-ready C* complex (prior to step-II)
Method: single particle / : Wan R, Bai R

EMDB-81104:
Human minor spliceosome branching-completed C complex (after step-I) with stably-bound RBM48 region
Method: single particle / : Bai R, Wan R

EMDB-81123:
Focused refinement map of SYF region from the human minor spliceosome branching-completed C complex
Method: single particle / : Bai R, Wan R

EMDB-81125:
Focused refinement map of PRP16 region from the human minor spliceosome branching-completed C complex
Method: single particle / : Bai R, Wan R

EMDB-81127:
Focused refinement map of helicase region (encompassing PRP16 and BRR2) from the human minor spliceosome branching-completed C complex
Method: single particle / : Bai R, Wan R

EMDB-81129:
Human minor spliceosome branching-completed C complex (after step-I) with stably-bound PRP8-RNase H region
Method: single particle / : Bai R, Wan R

EMDB-81130:
Focused refinement map of EJC region from the human minor spliceosome branching-completed C complex
Method: single particle / : Bai R, Wan R

EMDB-81137:
Focused refinement map of RBM48 region from the human minor spliceosome exon-ligation-ready C* complex
Method: single particle / : Bai R, Wan R

EMDB-81138:
Focused refinement map of SYF region from the human minor spliceosome exon-ligation-ready C* complex
Method: single particle / : Bai R, Wan R

EMDB-81139:
Human minor spliceosome exon-ligation-ready C* complex (prior to step-II) with stably-bound WDR25 region
Method: single particle / : Bai R, Wan R

EMDB-81140:
Human minor spliceosome exon-ligation-ready C* complex (prior to step-II) with stably-bound BRR2 region
Method: single particle / : Bai R, Wan R

EMDB-81143:
Human minor spliceosome exon-ligation-ready C* complex (prior to step-II) with stably-bound IBC region
Method: single particle / : Bai R, Wan R

EMDB-81144:
Focused refinement map of PRP22 region from the human minor spliceosome exon-ligation-ready C* complex
Method: single particle / : Bai R, Wan R

EMDB-81145:
Focused refinement map of EJC region from the human minor spliceosome exon-ligation-ready C* complex
Method: single particle / : Bai R, Wan R

EMDB-81204:
Focused refinement map of IBC region from the human minor spliceosome branching-completed C complex
Method: single particle / : Bai R, Wan R

EMDB-65636:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-65637:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4k:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4l:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-69908:
Cryo-EM structure of TRP melastatin channel in the desensitized state, with icilin (10min)
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69909:
Cryo-EM structure of TRP melastatin channel with icilin (10min)
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69929:
Cryo-EM structure of TRP melastatin channel in the putative intermediate 3, without CHS
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69930:
Cryo-EM structure of TRP melastatin channel in the putative desensitized state, without CHS
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69932:
Cryo-EM structure of TRP melastatin channel in the putative intermediate 2 state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69933:
Cryo-EM structure of TRP melastatin channel in the putative twofold intermediate 1 state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-69934:
Cryo-EM structure of TRP melastatin channel in the putative desensitized state, with EGTA
Method: single particle / : Kim SH, Park H, Lee HH

EMDB-77477:
apo-bmCCAN consensus refinement
Method: single particle / : Yatskevich S, Ciferri C

EMDB-65488:
Cryo-EM structure of LARS1:IARS1 complex
Method: single particle / : Kim Y, Kim JC, Kim DW, Kim J, Lee J, Kim S, Kang JY, Park HS

PDB-9w01:
Cryo-EM structure of LARS1:IARS1 complex
Method: single particle / : Kim Y, Kim JC, Kim DW, Kim J, Lee J, Kim S, Kang JY, Park HS

EMDB-66504:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66505:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66506:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66507:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66508:
Phage T4 tip of the tail tube in post-tail-contraction state (genome-empty particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66675:
Phage T4 protruding part of the tail tube in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3o:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3p:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3q:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3r:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more