[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 37 items for (author: soman & a)

EMDB-52199:
Focused map of the MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

PDB-9hir:
MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

EMDB-29493:
Cryo-EM structure of human Needle/NAIP/NLRC4 (R288A)
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

EMDB-29496:
Cryo-EM structure of full-length human NLRC4 inflammasome with C11 symmetry
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

EMDB-29498:
Cryo-EM structure of full-length human NLRC4 inflammasome with C12 symmetry
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

PDB-8fvu:
Cryo-EM structure of human Needle/NAIP/NLRC4 (R288A)
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

PDB-8fw2:
Cryo-EM structure of full-length human NLRC4 inflammasome with C11 symmetry
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

PDB-8fw9:
Cryo-EM structure of full-length human NLRC4 inflammasome with C12 symmetry
Method: single particle / : Matico RE, Yu X, Miller R, Somani S, Ricketts MD, Kumar N, Steele RA, Medley Q, Berger S, Faustin B, Sharma S

EMDB-31806:
Telomeric mononucleosome
Method: single particle / : Soman A

EMDB-31810:
Telomeric Dinucleosome
Method: single particle / : Soman A

EMDB-31815:
Telomeric Dinucleosome in open state
Method: single particle / : Soman A

EMDB-31816:
Telomeric trinucleosome
Method: single particle / : Soman A

EMDB-31823:
Telomeric tetranucleosome
Method: single particle / : Soman A

EMDB-31826:
Telomeric trinucleosome in open state
Method: single particle / : Soman A

EMDB-31832:
Telomeric tetranucleosome in open state
Method: single particle / : Soman A

EMDB-31907:
Telomeric Dinucleosome at 4.6 angstroms
Method: single particle / : Soman A

EMDB-31908:
Telomeric Dinucleosome at 5angstroms
Method: single particle / : Soman A

EMDB-31909:
Open dinucleosome at 6.6 angstroms
Method: single particle / : Soman A

PDB-7v90:
Telomeric mononucleosome
Method: single particle / : Soman A

PDB-7v96:
Telomeric Dinucleosome
Method: single particle / : Soman A

PDB-7v9c:
Telomeric Dinucleosome in open state
Method: single particle / : Soman A

PDB-7v9j:
Telomeric trinucleosome
Method: single particle / : Soman A

PDB-7v9k:
Telomeric tetranucleosome
Method: single particle / : Soman A

PDB-7v9s:
Telomeric trinucleosome in open state
Method: single particle / : Soman A

PDB-7va4:
Telomeric tetranucleosome in open state
Method: single particle / : Soman A

EMDB-24896:
CryoEM structure of Gq-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF

EMDB-24897:
CryoEM structure of Gi-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF

EMDB-24898:
CryoEM structure of Gq-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF

EMDB-24899:
CryoEM structure of Gi-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF

EMDB-24900:
CryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134
Method: single particle / : Cao C, Fay JF

PDB-7s8l:
CryoEM structure of Gq-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

PDB-7s8m:
CryoEM structure of Gi-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

PDB-7s8n:
CryoEM structure of Gq-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

PDB-7s8o:
CryoEM structure of Gi-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

PDB-7s8p:
CryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

EMDB-30161:
Linker Histone Defines Structure and Self-Association Behaviour of the 177 bp Human Chromatosome
Method: single particle / : Wang S, Vogirala VK, Soman A, Sandin S, Liu ZB

PDB-7dbp:
Linker histone defines structure and self-association behaviour of the 177 bp human chromosome
Method: single particle / : Wang S, Vogirala KV, Soman A, Liu ZB

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more