[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 46 items for (author: sobott & f)

EMDB-50594:
Rigor actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

EMDB-19013:
CryoEM structure of the primed actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

EMDB-19030:
CryoEM structure of the post-powerstroke actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

EMDB-19031:
CryoEM structure of primed myosin-5a (ADP-Pi state)
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

PDB-8r9v:
CryoEM structure of the primed actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

PDB-8rbf:
CryoEM structure of the post-powerstroke actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

PDB-8rbg:
CryoEM structure of primed myosin-5a (ADP-Pi state)
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

EMDB-16466:
The structural architecture of alpha-synuclein oligomer
Method: single particle / : Cuellar J, Santos J, Pallares I, Ventura S, Valpuesta JM

EMDB-16528:
3D reconstruction of alpha-synuclein oligomer-PSMa3 complex
Method: single particle / : Cuellar J, Santos J, Pallares I, Ventura S, Valpuesta JM

EMDB-14981:
Structure of b-galactosidase without reducing agent prepared by Vitrobot
Method: single particle / : Klebl DP, Wang Y

EMDB-14982:
Structure of b-galactosidase with DTT prepared by Vitrobot
Method: single particle / : Klebl DP, Wang Y

EMDB-14983:
Structure of b-galactosidase with TCEP prepared by Vitrobot
Method: single particle / : Klebl DP, Wang Y

EMDB-14984:
Structure of b-galactosidase on continuous carbon support film prepared by Vitrobot
Method: single particle / : Klebl DP, Wang Y

EMDB-15162:
Structure of the human mitochondrial HSPD1 single ring from grids produced in 14ms
Method: single particle / : Klebl DP, Wang Y, Thompson RF, Muench SP

EMDB-15167:
Structure of the human mitochondrial HSPD1 single ring in the presence of Methionine
Method: single particle / : Klebl DP, Wang Y, Thompson RF, Muench SP

EMDB-15176:
Structure of the human mitochondrial HSPD1 single ring in the presence of ascorbate
Method: single particle / : Klebl DP, Wang Y, Thompson RF, Muench SP

EMDB-15178:
Structure of the human mitochondrial HSPD1 single ring (blotted but no DTT)
Method: single particle / : Klebl DP, Wang Y, Thompson RF, Muench SP

EMDB-12043:
AcrB in cycloalkane amphipol
Method: single particle / : Higgins AJ, Flynn AJ

PDB-7b5p:
AcrB in cycloalkane amphipol
Method: single particle / : Higgins AJ, Flynn AJ, Muench SP

EMDB-13328:
Time-resolved cryo-EM structures of ATP-induced actomyosin dissociation
Method: helical / : Klebl DP, White HD, Sobott F, Muench SP

EMDB-11715:
Cryo-EM reconstruction of the di-hexameric endocytic adaptor complex AENTH (ENTH F5A/L12A/V13A mutant)
Method: single particle / : Klebl DP, Lizarrondo J, Sobott F, Garcia-Alai MM, Muench SP

EMDB-11987:
Structure of the endocytic adaptor complex AENTH
Method: single particle / : Klebl DP, Lizarrondo J

PDB-7b2l:
Structure of the endocytic adaptor complex AENTH
Method: single particle / : Klebl DP, Lizarrondo J, Sobott F, Garcia-Alai M, Muench SP

EMDB-11189:
Structure of human mitochondrial HSPD1 as an inverted double ring
Method: single particle / : Klebl DP, Feasey MC, Muench SP

EMDB-11950:
Structure of the human mitochondrial HSPD1 single ring
Method: single particle / : Klebl DP, Feasey MC, Muench SP

PDB-7azp:
Structure of the human mitochondrial HSPD1 single ring
Method: single particle / : Klebl DP, Feasey MC, Muench SP

EMDB-10871:
30S ribosome subunit deposited by spraying (13 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10872:
30S ribosome subunit deposited using the chameleon (54 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10873:
30S ribosome subunit deposited using the chameleon (200 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10874:
30S ribosome subunit prepared by blotting
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10875:
50S ribosome subunit deposited by spraying (13 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10876:
50S ribosome subunit deposited using the chameleon (54 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10877:
50S ribosome subunit deposited using the chameleon (200 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10878:
50S ribosome subunit prepared by blotting
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10879:
70S ribosome deposited by spraying (13 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10880:
70S ribosome deposited using the chameleon (54 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10881:
70S ribosome deposited using the chameleon (200 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10882:
70S ribosome prepared by blotting
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10883:
HSPD1 single ring deposited by spraying (6 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10884:
HSPD1 single ring deposited by spraying (50 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10885:
HSPD1 single ring deposited using the chameleon (54 ms delay)
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10886:
HSPD1 single ring prepared by blotting
Method: single particle / : Klebl DP, Gravett MSC, Darrow M, Thompson RF, Muench SP

EMDB-10533:
Horse spleen apoferritin deposited with a microfluidic sprayer
Method: single particle / : Klebl DP, Muench SP

EMDB-4485:
Structure of horse spleen apoferritin deposited by spraying
Method: single particle / : Kontziampasis D, Klebl DP, Iadanza MG, Scarff CA, Kopf F, Sobott F, Monteiro DCF, Trebbin M, Muench SP, White HD

EMDB-4487:
Structure of E. coli ribosome deposited by spraying
Method: single particle / : Kontziampasis D, Klebl DP, Iadanza MG, Scarff CA, Kopf F, Sobott F, Monteiro DCF, Trebbin M, Muench SP, White HD

EMDB-4488:
Structure of the actin core of porcine thin filaments deposited by spraying
Method: helical / : Kontziampasis D, Klebl DP, Iadanza MG, Scarff CA, Kopf F, Sobott F, Monteiro DCF, Trebbin M, Muench SP, White HD

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more