[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 68 items for (author: shiyi & g)

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-61433:
Cryo-EM structure of [Pen5]-urotensin (4-11)-bounded human Urotensin receptor (UTS2R)-Gq complex
Method: single particle / : Xu HE, You C, Gao T, Duan J

PDB-9jfk:
Cryo-EM structure of [Pen5]-urotensin (4-11)-bounded human Urotensin receptor (UTS2R)-Gq complex
Method: single particle / : Xu HE, You C, Gao T, Duan J

EMDB-63857:
cryo-EM structure of pig GnRHR bound with mammal GnRH
Method: single particle / : Shen S, Xu HE

EMDB-63858:
cryo-EM structure of Xenopus laevis GnRHR bound with mammal GnRH
Method: single particle / : Shen S, Xu HE

PDB-9u4w:
cryo-EM structure of pig GnRHR bound with mammal GnRH
Method: single particle / : Shen S, Xu HE

PDB-9u4y:
cryo-EM structure of Xenopus laevis GnRHR bound with mammal GnRH
Method: single particle / : Shen S, Xu HE

EMDB-60650:
Cryo-EM Structure of SSTR1-Gi SST analogs complex
Method: single particle / : Wong TS, Zeng ZC, Xiong TT, Gan SY, Du Y

EMDB-60651:
Cryo-EM Structure of SST analogs bond SSTR1-Gi complex
Method: single particle / : Wong TS, Zeng ZC, Xiong TT, Gan SY, Du Y

PDB-9ik8:
Cryo-EM Structure of SSTR1-Gi SST analogs complex
Method: single particle / : Wong TS, Zeng ZC, Xiong TT, Gan SY, Du Y

PDB-9ik9:
Cryo-EM Structure of SST analogs bond SSTR1-Gi complex
Method: single particle / : Wong TS, Zeng ZC, Xiong TT, Gan SY, Du Y

EMDB-39260:
Cryo-EM structure of partial VP4 from simian rotavirus SA11
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

EMDB-39261:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

EMDB-39262:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13 at Low concentration
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

EMDB-39263:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (left side)
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

EMDB-39264:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (right side)
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

PDB-8ygr:
Cryo-EM structure of partial VP4 from simian rotavirus SA11
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

PDB-8ygs:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

PDB-8ygt:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (left side)
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

PDB-8ygu:
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (right side)
Method: single particle / : Huang Y, Sun H, Zheng Q, Li S, Ge S, Xia N

EMDB-62323:
Cryo-EM structure of simian rotavirus SA11 TLP in complex with nAb 41# (37 degree Celsius, 1 h)
Method: single particle / : Huang Y, Sun H, Song F, Zheng Q, Li S, Xia N

EMDB-60607:
A local Cryo-EM structure of Bitter taste receptor TAS2R14
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

EMDB-60608:
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Ggust
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

EMDB-60626:
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

EMDB-60627:
A local Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

PDB-9iiw:
A local Cryo-EM structure of Bitter taste receptor TAS2R14
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

PDB-9iix:
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Ggust
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

PDB-9ij9:
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

PDB-9ija:
A local Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Method: single particle / : Yuan Q, Duan J, Tao L, Xu EH

EMDB-38418:
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Method: single particle / : Lu Y, Guo H, Ji X, Yang H

PDB-8xki:
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Method: single particle / : Lu Y, Guo H, Ji X, Yang H

EMDB-60141:
Cryo-EM structure of kisspeptin receptor bound to KP-10
Method: single particle / : Shen S, Liu H, Xu HE

EMDB-60142:
Cryo-EM structure of kisspeptin receptor bound to TAK-448
Method: single particle / : Shen S, Liu H, Xu HE

PDB-8zjd:
Cryo-EM structure of kisspeptin receptor bound to KP-10
Method: single particle / : Shen S, Liu H, Xu HE

PDB-8zje:
Cryo-EM structure of kisspeptin receptor bound to TAK-448
Method: single particle / : Shen S, Liu H, Xu HE

EMDB-34543:
Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (intermediate state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

EMDB-34544:
Structure of the dimeric Xenopus tropical acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (closed state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

EMDB-34545:
Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR (resting state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

PDB-8h8d:
Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (intermediate state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

PDB-8h8e:
Structure of the dimeric Xenopus tropical acid-sensitive outwardly rectifying channel ASOR trimer bound with tRNA (closed state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

PDB-8h8f:
Structure of Xenopus tropicalis acid-sensitive outwardly rectifying channel ASOR (resting state)
Method: single particle / : Chi P, Wang X, Li J, Li K, Zhang Y, Geng J, Wu J, Deng D

EMDB-36005:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound MK-6892
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

EMDB-36007:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound niacin
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

PDB-8j6i:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound MK-6892
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

PDB-8j6l:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound niacin
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

EMDB-36006:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound with GSK256073
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

PDB-8j6j:
Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound with GSK256073
Method: single particle / : Yuan Q, Zhu S, Duan J, Xu HE, Duan X

EMDB-29943:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Yang D, Sheng C, Jinpeng S

EMDB-29944:
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
Method: single particle / : Shenming H, Mengyao X, Lei L, Jiangqian M, Sheng C, Jinpeng S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more