[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: sauer & db)

EMDB-50668:
Cryo-EM structure of MmCAT1 bound with FrMLV-RBD in the apo inward-open state
Method: single particle / : Ye M, Zhou D, Pike ACW, Wang S, Wang D, Bakshi S, Brooke L, Williams E, Elkins J, Stuart DI, Sauer DB

EMDB-50669:
Cryo-EM structure of MmCAT1 bound with FrMLV-RBD in the arginine-bound inward-occluded state
Method: single particle / : Ye M, Zhou D, Pike ACW, Wang S, Wang D, Bakshi S, Brooke L, Williams E, Elkins J, Stuart DI, Sauer DB

EMDB-50670:
Cryo-EM structure of MmCAT1 bound with FrMLV-RBD in the lysine-bound inward-occluded state
Method: single particle / : Ye M, Zhou D, Pike ACW, Wang S, Wang D, Bakshi S, Brooke L, Williams E, Elkins J, Stuart DI, Sauer DB

EMDB-50671:
Cryo-EM structure of MmCAT1 bound with FrMLV-RBD in the ornithine-bound inward-occluded state
Method: single particle / : Ye M, Zhou D, Pike ACW, Wang S, Wang D, Bakshi S, Brooke L, Williams E, Elkins J, Stuart DI, Sauer DB

EMDB-50525:
Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody - MBP local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Carrique L, Fairhead M, Li H, Duerr K, Zhang P, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-50430:
Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody
Method: single particle / : Yi G, Ye M, Mamalis D, Carrique L, Fairhead M, Li H, Duerr K, Zhang P, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-50432:
Cryo-EM structure of Lysozyme homo-dimer assembled by homo Di-Gluebody
Method: single particle / : Yi G, Ye M, Mamalis D, Carrique L, Fairhead M, Li H, Duerr K, Zhang P, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-50433:
Cryo-EM structure of Lysozyme homo-dimer assembled by homo Di-Gluebody - Local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Carrique L, Fairhead M, Li H, Duerr K, Zhang P, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-50405:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001T-N
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50364:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001M-T
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50406:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN006A-P
Method: single particle / : Chi G, Bohstedt T, Geertsma E, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-50407:
EM Map of KCC3b (SLC12A6b) in Complex with Nanobody Binder BN001P-S
Method: single particle / : Chi G, Bohstedt T, Stefanic S, Castro-Hartmann P, Qian P, Burgess-Brown N, Sader K, Duerr KL, Sauer DB

EMDB-51568:
Human adult muscle nAChR in resting state in detergent with alpha-bungarotoxin
Method: single particle / : Li A, Pike ACW, Chi G, Webster R, Maxwell S, Liu W, Beeson D, Sauer DB, Dong YY

EMDB-51569:
Human adult muscle nAChR in resting state in nanodisc with alpha-bungarotoxin
Method: single particle / : Li A, Pike ACW, Chi G, Webster R, Maxwell S, Liu W, Beeson D, Sauer DB, Dong YY

EMDB-51570:
Human adult muscle nAChR in desensitised state in nanodisc with 100 uM acetylcholine
Method: single particle / : Li A, Pike ACW, Chi G, Webster R, Maxwell S, Liu W, Beeson D, Sauer DB, Dong YY

EMDB-51571:
Human adult muscle nAChR in desensitised state in nanodisc with 1 mM acetylcholine
Method: single particle / : Li A, Pike ACW, Chi G, Webster R, Maxwell S, Liu W, Beeson D, Sauer DB, Dong YY

EMDB-19331:
DNA helicase RECQL5 in complex with homo Di-Gluebody G5-006
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19332:
DNA helicase RECQL5 in complex with homo Di-Gluebody G5-006 - RECQL5 local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19333:
SPNS2 in complex with homo Di-Gluebody GbD12
Method: single particle / : Yi G, Ye M, Mamalis D, Li H, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19334:
SPNS2 in complex with homo Di-Gluebody GbD12 - SPNS2 local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19335:
RECQL5:sfGFP hetero dimer assembled by Di-Gluebody
Method: single particle / : Yi G, Ye M, Mamalis D, Fairhead M, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19336:
RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - RECQL5 local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19337:
RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Fairhead M, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19338:
SPNS2:sfGFP hetero dimer assembled by Di-Gluebody
Method: single particle / : Yi G, Ye M, Mamalis D, Li H, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19339:
SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - SPNS2 local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-19340:
SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - sfGFP local refinement
Method: single particle / : Yi G, Ye M, Mamalis D, Sauer DB, von Delft F, Davis BG, Gilbert RJC

EMDB-18770:
Structure of human ceramide synthase 6 (CerS6) bound to C16:0
Method: single particle / : Pascoa TC, Pike ACW, Chi G, Stefanic S, Quigley A, Chalk R, Mukhopadhyay SMM, Venkaya S, Dix C, Moreira T, Tessitore A, Cole V, Chu A, Elkins JM, Pautsch A, Schnapp G, Carpenter EP, Sauer DB

EMDB-18771:
Structure of human ceramide synthase 6 (CerS6) in complex with N-palmitoyl fumonisin B1
Method: single particle / : Pascoa TC, Pike ACW, Chi G, Stefanic S, Quigley A, Chalk R, Mukhopadhyay SMM, Venkaya S, Dix C, Moreira T, Tessitore A, Cole V, Chu A, Elkins JM, Pautsch A, Schnapp G, Carpenter EP, Sauer DB

EMDB-19869:
Structure of human ceramide synthase 6 (CerS6) bound to C16:0 (nanobody Nb02)
Method: single particle / : Pascoa TC, Pike ACW, Chi G, Stefanic S, Quigley A, Chalk R, Mukhopadhyay SMM, Venkaya S, Dix C, Moreira T, Tessitore A, Cole V, Chu A, Elkins JM, Pautsch A, Schnapp G, Carpenter EP, Sauer DB

EMDB-17380:
Structure of human SIT1 bound to L-pipecolate (focussed map / refinement)
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17381:
Structure of human SIT1:ACE2 complex (open PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-17382:
Structure of human SIT1:ACE2 complex (closed PD conformation) bound to L-pipecolate
Method: single particle / : Li HZ, Pike ACW, Chi G, Hansen JS, Lee SG, Rodstrom KEJ, Bushell SR, Speedman D, Evans A, Wang D, He D, Shrestha L, Nasrallah C, Chalk R, Moreira T, MacLean EM, Marsden B, Bountra C, Burgess-Brown NA, Dafforn TR, Carpenter EP, Sauer DB

EMDB-18659:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Pilati N, Marasco A, Gunthorpe M, Alvaro G, Large C, Lakshminaraya B, Williams E, Sauer DB

EMDB-18660:
Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT5
Method: single particle / : Chi G, Mckinley G, Marsden B, Pike ACW, Ye M, Brooke LM, Bakshi S, Lakshminarayana B, Pilati N, Marasco A, Gunthorpe M, Alvaro GS, Large CH, Williams E, Sauer DB

EMDB-25756:
Structure of VcINDY-apo
Method: single particle / : Sauer DB, Marden JJ

EMDB-25757:
Structure of VcINDY-Na+
Method: single particle / : Sauer DB, Marden JJ

EMDB-23463:
NorA in complex with Fab25
Method: single particle / : Brawley DN, Sauer DB

EMDB-23464:
NorA in complex with Fab36
Method: single particle / : Brawley DN, Sauer DB

EMDB-12794:
Cryo-EM structure of a twisted-dimer transthyretin amyloid fibril from vitreous body of the eye
Method: helical / : Iakovleva I, Sauer-Eriksson AE

PDB-7ob4:
Cryo-EM structure of a twisted-dimer transthyretin amyloid fibril from vitreous body of the eye
Method: helical / : Iakovleva I, Sauer-Eriksson AE

EMDB-22456:
Structure of the NaCT-PF2 complex
Method: single particle / : Sauer DB, Wang B

EMDB-22457:
Structure of the NaCT-Citrate complex
Method: single particle / : Sauer DB, Wang B

EMDB-21902:
Structure of apo LaINDY
Method: single particle / : Sauer DB, Marden JJ

EMDB-21903:
Structure of the LaINDY-malate complex
Method: single particle / : Sauer DB, Marden JJ

EMDB-21904:
Structure of VcINDY-Na+ in amphipol
Method: single particle / : Sauer DB, Marden JJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more