[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 643 items for (author: s. & wu)

PDB-21du:
Cryo-EM structure of the apomorphine bound ADGRG6-Gs complex
Method: single particle / : Han S, Wu B, Zhao Q

PDB-9yha:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yhb:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-22ix:
cryo-ET subtomogram-averaged structure of mouse heavy-chain apoferritin resolved at 2.71 Angstroms
Method: subtomogram averaging / : Mazmanian K, Wang CH, Hsu ST, Wu KP, Chang YC

PDB-9mpz:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS12
Method: single particle / : Wu S, Lei D

PDB-9mq0:
Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS5
Method: single particle / : Wu S, Lei D

PDB-9ubw:
The atomic coordinates of the mouse CatSper dimer
Method: single particle / : Xu Q, Lin S, Zhao Q, Yan Z, Wu J

PDB-9ubx:
The atomic coordinates of the mouse CatSper trimer
Method: single particle / : Xu Q, Lin S, Zhao Q, Yan Z, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9kt6:
HCA3-Gi complex with acifran
Method: single particle / : Wu S, Wu S

PDB-9kt7:
Cryo-EM structure of HCA2-Gi complex with MK6892
Method: single particle / : Wu S, Wu S

PDB-9kt8:
Cryo-EM structure of HCA2-Gi complex with acifran
Method: single particle / : Wu S

PDB-9kt9:
Cryo-EM structure of HCA1-Gi complex with 3,5-DHBA
Method: single particle / : Wu S

PDB-9jg1:
Cryo-EM structure of Adriforant-bound Histamine receptor 4 H4R at inactive state
Method: single particle / : Jin SS, Zhang H, Jiang Y

PDB-9kmt:
Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State1
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmu:
Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State2
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmv:
SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State1
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmw:
SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State2
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmx:
Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State1
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmy:
Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State2
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kmz:
Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State1
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9kn0:
Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State2
Method: single particle / : Yuan S, Yan R, Wu M

PDB-9wxm:
Cryo-EM structure of the full-length GPR15L bound GPR15-Gi complex
Method: single particle / : Han S, Wu B, Zhao Q

PDB-8zr9:
Cryo-EM structure of AbCapV filemant bound with 3',3'-cGAMP
Method: single particle / : Kong JP, Li ZX, Ke SY, Xiao YB

PDB-9jeh:
Cryo-EM structure of AbCapV dimer, apo form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

PDB-9jek:
Cryo-EM structure of AbCapV tetramer, intermediate form
Method: single particle / : Kong JP, Li ZX, Ke SY, Wu WQ, Xiao YB

PDB-9k8v:
Cryo-EM structure of the Type II secretion system protein from Vibrio cholerae
Method: single particle / : Liu RH, Feng QS, Zhang K, Dai X, Dai J, Guo XR, Lin WF, Wang ZF, Fu Y, Li Y

PDB-9uev:
Structure of the SFTSV Gn head protein in complex with Nb261 and Nb318
Method: single particle / : Liang SJ, Lou ZY, Wu XL

PDB-8yy6:
Structure of a murine monoclonal antibody Fab5 targeting Epstein-Barr virus gB
Method: single particle / : Fang XY, Sun C, Zeng MS, Liu Z

PDB-9le7:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C4S4M4-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

PDB-9le8:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C2S2M2-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

PDB-9leo:
LayV-G Head in complex of LayG-1069 and LayG-1133
Method: single particle / : Yan RH, Wu SY

PDB-9jmb:
Cryo-EM structure of HSV-2 gB and FAB 16F9 complex
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9jme:
Cryo-EM structure of BV gB and FAB 16F9 complex
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9jmr:
Cryo-EM structure of PRV gB and FAB 16f9 complex
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9jms:
Cryo-EM structure of VZV gB and FAB 16F9 complex
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9jeq:
Cryo-EM structure of Histamine-bound Histamine receptor 3 H3R G protein complex
Method: single particle / : Jin SS, Zhang H, Jiang Y

PDB-9jed:
Cryo-EM structure of Histamine-bound Histamine receptor 4 H4R G protein complex
Method: single particle / : Jin S, Zhang H, Jiang Y

PDB-8zbw:
Cryo-EM structure of formyl peptide receptor 2/C1R receptor in complex with Gi
Method: single particle / : Zhou Q, Lin S, Li G

PDB-9rpd:
D. melanogaster Augmin TII N-clamp (GST-fusion) bound to a microtubule, well-defined subset of particles
Method: single particle / : Wuertz M, Vermeulen BJA, Tonon G, Pfeffer S

PDB-9lmq:
Cryo-EM structure of TIR-STING/c-di-GMP complex
Method: single particle / : Lu DF, Liu S

PDB-9lmr:
Cryo-EM structure of TIR-STING/c-di-GMP complex fiber
Method: single particle / : Lu DF, Liu S

PDB-9iy3:
Iterative acetyltransferase on lasso peptides from Actinomycetes in complex with CoA
Method: single particle / : Wu S, Xiong J, Lei D, Dong S

PDB-9iy4:
Iterative acetyltransferase on lasso peptides from Actinomycetes in complex with AcCoA
Method: single particle / : Wu S, Xiong J, Lei D, Dong S

PDB-9ken:
cryo-EM structure of TRIP12 in complex with K29/48 branched-triUb
Method: single particle / : Ai HS, Wu XW, Liu L

PDB-9khs:
Cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked diUb (monomeric conformation)
Method: single particle / : Ai HS, Tong ZB, Liu L

PDB-9kht:
cryo-EM structure of Ufd2/Ubc4-Ub in complex with K29-linked triUb (dimeric conformation)
Method: single particle / : Ai HS, Tong ZB, Liu L

PDB-9jie:
Rat hepatitis E virus capsid protein E2s domain in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S

PDB-9jif:
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S

PDB-9jig:
Hepatitis E virus capsid protein E2s domain (genotype IV) in complex with Fab C6
Method: single particle / : Liu L, Zheng Q, Li S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more