[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 39 items for (author: ruby & eg)

EMDB-75112:
SK3D-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75120:
OX1-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75121:
SK5A-Matured apo state in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75122:
SK5B-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75123:
SK3D-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75127:
SK5G-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75128:
OX1-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75129:
SK5A-Matured glycine/glutamate in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75134:
SK5G-Germline
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75136:
SK5A-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-75138:
SK5B-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10en:
SK3D-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ev:
OX1-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ex:
SK5A-Matured apo state in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ey:
SK5B-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ez:
SK3D-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fd:
SK5G-Matured in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fe:
OX1-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10ff:
SK5A-Matured glycine/glutamate in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fl:
SK5G-Germline
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fn:
SK5A-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

PDB-10fo:
SK5B-Germline in complex with GluN1-GluN2B, full refinement
Method: single particle / : Kleeman SO, Furukawa HF

EMDB-54058:
1.7 A structure of conventional mouse heavy chain Apoferritin
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54082:
1.8 A structure of SiO2-sealed and revitrified (210 us) mouse heavy chain Apoferritin
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54136:
2.5 A structure of the E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54137:
2.4 A structure of the SiO2-sealed and revitrified (30 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54138:
2.3 A structure of the SiO2-sealed and revitrified (150 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-54168:
2.7 A structure of the SiO2-sealed and revitrified (300 us) E.coli 50S ribosomal subunit
Method: single particle / : Curtis WA, Hruby J, Krueger CR, Barrass SV, Drabbels M, Lorenz UJ

EMDB-3813:
Tomogram of the salmonella enterica wild-type bacterial flagellar motor
Method: electron tomography / : Beeby M, Ribardo DA, Brennan CA, Ruby EG, Jensen GJ, Hendrixson DR

EMDB-3150:
Diverse high-torque bacterial flagellar motors assemble wider stator rings using a conserved protein scaffold
Method: subtomogram averaging / : Beeby M

EMDB-3154:
Salmonella enterica wild-type bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3155:
Vibrio fischeri wild-type bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3156:
Vibrio fischeri motB deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3157:
Campylobacter jejuni motB deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3158:
Campylobacter jejuni flgQ deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3159:
Campylobacter jejuni flgP deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3160:
Campylobacter jejuni pflA deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3161:
Campylobacter jejuni pflB deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

EMDB-3162:
Vibrio fischeri flgP deletion bacterial flagellar motor
Method: subtomogram averaging / : Beeby M

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more