[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 140 items for (author: rheinberger & j)

EMDB-18621:
ASCT2 trimer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18622:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.1)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18623:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.2)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18624:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.3)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18625:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-up)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18626:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-down)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18627:
ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the outward-facing state (OFS)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-18628:
ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the intermediate outward-facing state (iOFS-up)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qro:
ASCT2 trimer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrp:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.1)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrq:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.2)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrr:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.3)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrs:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-up)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qru:
ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-down)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrv:
ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the outward-facing state (OFS)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

PDB-8qrw:
ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the intermediate outward-facing state (iOFS-up)
Method: single particle / : Borowska A, Rheinberger J, Paulino C, Slotboom DJ

EMDB-17596:
Ligand-free SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17598:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 1
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17599:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 2
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17601:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 3
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17602:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 4
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17603:
Ligand-free SpSLC9C1 in detergent, asymmetric class
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17604:
Ligand-free SpSLC9C1 in detergent, symmetric class
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17605:
cAMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17607:
cAMP-bound SpSLC9C1 in lipid nanodiscs, protomer state 1
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17621:
cGMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17622:
cGMP-bound SpSLC9C1 in lipid nanodiscs, protomer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-17625:
cAMP-bound SpSLC9C1 in lipid nanodiscs, protomer state 2
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pcz:
Ligand-free SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd2:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 1
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd3:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 2
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd5:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 3
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd7:
Ligand-free SpSLC9C1 in lipid nanodiscs, protomer state 4
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd8:
cAMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pd9:
cAMP-bound SpSLC9C1 in lipid nanodiscs, protomer state 1
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pdu:
cGMP-bound SpSLC9C1 in lipid nanodiscs, dimer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

PDB-8pdv:
cGMP-bound SpSLC9C1 in lipid nanodiscs, protomer
Method: single particle / : Kalienkova V, Peter M, Rheinberger J, Paulino C

EMDB-16120:
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

EMDB-16121:
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

EMDB-16122:
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

EMDB-16123:
Cryo-EM structure of the wild-type solitary ECF module in DDM micelles in the ATPase open and nucleotide-free conformation
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

EMDB-16124:
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

PDB-8bmp:
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

PDB-8bmq:
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

PDB-8bmr:
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

PDB-8bms:
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Method: single particle / : Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ

EMDB-14347:
Cryo-EM map of the WT KdpFABC complex in the E2-P conformation, stabilised with the inhibitor orthovanadate
Method: single particle / : Hielkema L, Stock C, Silberberg JM, Corey RA, Wunnicke D, Stansfeld PJ, Haenelt I, Paulino C

EMDB-14911:
Cryo-EM map of the WT KdpFABC complex in the E1-P tight conformation, stabilised with the inhibitor orthovanadate
Method: single particle / : Hielkema L, Stock C, Silberberg JM, Corey RA, Wunnicke D, Stansfeld PJ, Haenelt I, Paulino C

EMDB-14912:
Cryo-EM map of the WT KdpFABC complex in the E1-P tight conformation, under turnover conditions
Method: single particle / : Hielkema L, Stock C, Silberberg JM, Corey RA, Wunnicke D, Dubach VRA, Stansfeld PJ, Haenelt I, Paulino C

EMDB-14913:
Cryo-EM map of the WT KdpFABC complex in the E1_ATPearly conformation, under turnover conditions
Method: single particle / : Hielkema L, Stock C, Silberberg JM, Corey RA, Rheinberger J, Wunnicke D, Dubach VRA, Stansfeld PJ, Haenelt I, Paulino C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more