[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,333 items for (author: ping & y)

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-72073:
heterotrimeric ENaC channel complex PPK1/PPK26/PPK26
Method: single particle / : Jin P, Koepping L, Feng S

EMDB-72074:
heterotrimeric ENaC channel complex PPK1/PPK26/PPK26 with Vulnusin
Method: single particle / : Jin P, Koepping L, Feng S

EMDB-68988:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2)
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-68990:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) with phosphate
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-68992:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) at pH5.
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23ic:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2)
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23if:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) with phosphate
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23ig:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) at pH5.
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-72968:
6.9 A map of 3 x FBXO42-SKP1 bound to CCDC6-PP2Ac
Method: single particle / : Michaelian N, Azumaya CM, Hsu PL

EMDB-66002:
Subtomogram averaging of SARS-CoV-2 spike-P17-IgG Gemini structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66003:
Subtomogram averaging of SARS-CoV-2 spike-P17-IgG solo structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66004:
Subtomogram averaging of spike-P17-IgG solo structure on fixed SARS-CoV-2
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66005:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG Gemini structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66006:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG solo structure in 1-RBD-up conformation
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66007:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG solo structure in closed conformation
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66217:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-66218:
Cryo-electron tomogram of vesicular stomatitis virus (VSV) with rabies virus glycoprotein
Method: electron tomography / : Liu L, Zheng Q, Li S, Xia N

EMDB-67393:
Hemoglobin amyloid fibril - PM2
Method: helical / : Li S, Cao Q, Cao Y

PDB-20yj:
Hemoglobin amyloid fibril - PM2
Method: helical / : Li S, Cao Q, Cao Y

EMDB-69827:
horse myoglobin amyloid fibril - PM3
Method: helical / : Li S, Cao Q, Cao Y

EMDB-81514:
horse myoglobin amyloid fibril - PM2
Method: helical / : Li S, Cao Q, Cao Y

EMDB-81518:
horse myoglobin amyloid fibril - PM1
Method: helical / : Li S, Cao Q, Cao Y

PDB-24um:
horse myoglobin amyloid fibril - PM3
Method: helical / : Li S, Cao Q, Cao Y

PDB-27wm:
horse myoglobin amyloid fibril - PM2
Method: helical / : Li S, Cao Q, Cao Y

PDB-27wr:
horse myoglobin amyloid fibril - PM1
Method: helical / : Li S, Cao Q, Cao Y

EMDB-67024:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 2).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

EMDB-67025:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 3).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9xmg:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 2).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9xmi:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue (patient 3).
Method: helical / : Ma BY, Yao YX, Li D, Liu C

EMDB-65344:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue.
Method: helical / : Ma BY, Yao YX, Li D, Liu C

EMDB-65345:
Cryo-EM structure of Congo Red-bound ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissu
Method: helical / : Ma BY, Yao YX, Li D, Liu C

EMDB-65346:
Cryo-EM structure of ThS-bound ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue.
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9vtw:
Cryo-EM structure of ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue.
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9vtx:
Cryo-EM structure of Congo Red-bound ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissu
Method: helical / : Ma BY, Yao YX, Li D, Liu C

PDB-9vty:
Cryo-EM structure of ThS-bound ATTRA97S amyloid fibrils extracted from patient-derived abdominal adipose biopsy tissue.
Method: helical / : Ma BY, Yao YX, Li D, Liu C

EMDB-71429:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71430:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71431:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71432:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71433:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71434:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa1:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa2:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa3:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa4:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa5:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa6:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-66053:
Cryo-EM structure of human papillomavirus type 45 in complexed with the Fab fragment of A14D2
Method: single particle / : Jiang Y, Sun H, Wang Z, Zheng Q, Li S, Xia N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more