[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,349 items for (author: pal & m)

EMDB-18136:
ATP-bound IstB in complex to duplex DNA
Method: single particle / : de la Gandara A, Spinola-Amilibia M, Araujo-Bazan L, Nunez-Ramirez R, Berger JM, Arias-Palomo E

EMDB-18144:
IstA-IstB(E167Q) Strand Transfer Complex
Method: single particle / : de la Gandara A, Spinola-Amilibia M, Araujo-Bazan L, Nunez-Ramirez R, Berger JM, Arias-Palomo E

PDB-8q3w:
ATP-bound IstB in complex to duplex DNA
Method: single particle / : de la Gandara A, Spinola-Amilibia M, Araujo-Bazan L, Nunez-Ramirez R, Berger JM, Arias-Palomo E

PDB-8q4d:
IstA-IstB(E167Q) Strand Transfer Complex
Method: single particle / : de la Gandara A, Spinola-Amilibia M, Araujo-Bazan L, Nunez-Ramirez R, Berger JM, Arias-Palomo E

EMDB-18438:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-18439:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-18440:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-18443:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 4
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-18460:
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-18461:
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qrk:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qrl:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qrm:
mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qrn:
mt-SSU in GTPBP8 knock-out cells, state 4
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qu1:
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

PDB-8qu5:
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
Method: single particle / : Valentin Gese G, Cipullo M, Rorbach J, Hallberg BM

EMDB-45192:
Cryo-EM structure of PqqU with ligand PQQ
Method: single particle / : Munder F, Venugopal H, Grinter R

PDB-9c4o:
Cryo-EM structure of PqqU with ligand PQQ
Method: single particle / : Munder F, Venugopal H, Grinter R

EMDB-17528:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17529:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17530:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17531:
SerRS bound to serine tRNA
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-17532:
Serine tRNA from Trichoplusia ni
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7b:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7c:
CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

PDB-8p7d:
CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Method: single particle / : Throll P, Dolce LG, Kowalinski E

EMDB-44010:
INF2 at the Barbed End of F-Actin, Leading WH2 focus refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44123:
Cryo-EM density of GluK2 amino-terminal domain (GluK2-ATD) from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to ConA
Method: single particle / : Nadezhdin KD, Gangwar SP, Sobolevsky AI

EMDB-44126:
Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two concanavalin A dimers
Method: single particle / : Nadezhdin KD, Gangwar SP, Sobolevsky AI

EMDB-44127:
Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one concanavalin A dimer
Method: single particle / : Nadezhdin KD, Gangwar SP, Sobolevsky AI

EMDB-44009:
INF2 at the Barbed End of F-actin, Consensus refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44011:
INF2 at the Barbed End of F-Actin, Trailing WH2 focus refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44012:
INF2 at the Barbed End of F-Actin
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44018:
INF2 at the Barbed End of F-Actin with Incoming Profilin-Actin
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44019:
INF2 at the Barbed End of F-Actin with Incoming Actin
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44020:
INF2 in the Middle of F-Actin, Up state consensus refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44022:
INF2 in the Middle of F-actin, Up state focus refinement for the static WH2
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44023:
INF2 in the Middle of Actin filament
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44024:
INF2 at the Middle of F-Actin, Up state mobile FH2 local refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44025:
INF2 in the Middle of Actin Filament, Up state local refinement for static FH2
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44026:
INF2 in the Middle of F-Actin (Up state)
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44027:
INF2 in the middle of F-actin, Down state consensus map
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44031:
INF2 in the Middle of an Actin Filament, Down state actin local refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44032:
INF2 in the Middle of Actin Filament, Down state mobile FH2 local refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44033:
INF2 in the Middle of F-Actin, Down state static FH2 local refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44045:
INF2 in the Middle of F-Actin (Down state)
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44099:
Dia1 at the Barbed End of F-Actin
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44135:
Dia1 in the Middle of F-actin
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44943:
INF2 in the middle of F-Actin, Focus refinement for mobile WH2
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

EMDB-44948:
INF2 in the Middle of F-actin, Up state mobile WH2 focus refinement
Method: single particle / : Palmer NJ, Barrie KR, Dominguez R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more