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Showing 1 - 50 of 69 items for (author: okazaki & o)

EMDB-39941:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39942:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39944:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a translocation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39954:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a catalytically active state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-64064:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, middle state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9ud8:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, middle state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-63872:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrC-T225Y mutant from Vibrio cholerae
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J

EMDB-64059:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrC-T225Y mutant from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J

EMDB-64060:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64061:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64062:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound korormicin A
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64063:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, upper state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64065:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, down state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64066:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, stable state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64068:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, shifted state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64069:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound aurachin D-42
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-64518:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9u5g:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrC-T225Y mutant from Vibrio cholerae
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J

PDB-9ud2:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrC-T225Y mutant from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J

PDB-9ud3:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9ud4:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9ud5:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound korormicin A
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9ud6:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, upper state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9ud9:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, down state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9uda:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, stable state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9udf:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, shifted state
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9udg:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound aurachin D-42
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

PDB-9uuu:
Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH
Method: single particle / : Ishikawa-Fukuda M, Kishikawa J, Kato T, Murai M

EMDB-37486:
Cryo-EM structure of the PspCas13b-crRNA complex
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

EMDB-37487:
Cryo-EM structure of the PspCas13b-crRNA-target RNA complex (State 1)
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

EMDB-37488:
Cryo-EM structure of the PspCas13b-crRNA-target RNA complex (State 2)
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

EMDB-37489:
Cryo-EM structure of the dPspCas13b-ADAR2-crRNA-target RNA complex
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

PDB-8wf8:
Cryo-EM structure of the PspCas13b-crRNA complex
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

PDB-8wf9:
Cryo-EM structure of the PspCas13b-crRNA-target RNA complex (State 1)
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

PDB-8wfa:
Cryo-EM structure of the PspCas13b-crRNA-target RNA complex (State 2)
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

PDB-8wfb:
Cryo-EM structure of the dPspCas13b-ADAR2-crRNA-target RNA complex
Method: single particle / : Ishikawa J, Kato K, Yamashita K, Nishizawa T, Nishimasu H

EMDB-39644:
The isolated Vo domain of V/A-ATPase from Thermus thermophilus.
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

EMDB-39661:
Vo domain of V/A-ATPase from Thermus thermophilus state1
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

EMDB-39662:
Vo domain of V/A-ATPase from Thermus thermophilus state2
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

EMDB-39663:
Vo domain of V/A-ATPase from Thermus thermophilus state3
Method: single particle / : Nishida Y, Kishikawa J, Nakano A, Yokoyama K

PDB-8ywt:
The isolated Vo domain of V/A-ATPase from Thermus thermophilus.
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

PDB-8yxz:
Vo domain of V/A-ATPase from Thermus thermophilus state1
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

PDB-8yy0:
Vo domain of V/A-ATPase from Thermus thermophilus state2
Method: single particle / : Kishikawa J, Nishida Y, Nakano A, Yokoyama K

PDB-8yy1:
Vo domain of V/A-ATPase from Thermus thermophilus state3
Method: single particle / : Nishida Y, Kishikawa J, Nakano A, Yokoyama K

EMDB-60274:
SARS-CoV-2 XBB.1.5 spike glycoprotein trimer in complex with antigen-binding fragments (Fabs)
Method: single particle / : Sugita Y, Kimura K, Noda T, Hashiguchi T

EMDB-37827:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37828:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37829:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37830:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt6:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
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External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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